Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2928 ATGGCTACCAATGGAAAGCTTGAATTAGAAATTGAAGTAAAGTCCAGTGCTGATAAGTTCTGGAGTATCATCAAGGAGTCTGCAGCTATATTCCCTAAGGCTTTTCCAGATGATTACAAAAGCATCGAGATTCTTGAAGGTGATGGCAAGAGTGTTGGTTCTGTCCGTCTAATAACTTTTGGTGAAGGGTCACCACTTGTGAAGATAATCAAAGAGAAGATTGATGTTGTTGATGATTCAGAGAAGACACTAACCTATAGTGTTATTGATGGGGACATTCTTAATTACTTCAAGAGATTTAAGGGACACATCAGTGTAACACCTAAGAGTGATGGAAGCTTGGTGAAATGGTCTATTGAGTATGAAAAAAATAGTGAAGAGGTTCCTGAACCAGAGATAATTAAGGAATTTGCTCTTAAGACCTTTCTTAAGGTTGATGATTATATTCTAAATGCATAA 459 0.3682 MATNGKLELEIEVKSSADKFWSIIKESAAIFPKAFPDDYKSIEILEGDGKSVGSVRLITFGEGSPLVKIIKEKIDVVDDSEKTLTYSVIDGDILNYFKRFKGHISVTPKSDGSLVKWSIEYEKNSEEVPEPEIIKEFALKTFLKVDDYILNA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2928 152 Gene3D - 1 151 IPR023393 -
Psa4g2928 152 Pfam Pathogenesis-related protein Bet v 1 family 2 151 IPR000916 GO:0006952
Psa4g2928 152 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
Psa4g2928 152 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
Psa4g2928 152 SUPERFAMILY Bet v1-like 5 151 - -
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 51 60 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 68 87 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 87 100 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 PRINTS Major pollen allergen Bet V1 signature 141 151 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Psa4g2928 152 CDD Bet_v1-like 5 150 - -
Psa4g2928 152 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2928 Psa-Chr4 234954825 234955943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2928 - - qlo:115982756 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2928 4 234954825 234955943 Psa4g2928 4 234954825 234955943 ECH