Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2918 ATGAAGAAAATGCAGAAACAATTCAATCACATTATTCACACCCTCCTTATCCTATTCTCCATAATAACTGTTGGTTTTGCACTAAACCATGAAAAAGAGAAACACCAAAACCCATTCACTCCAAAAGCCTTCGTAATTCGTTACTGGGACAGAGTGATAAAAAACAACTTGCCAAAACCATCCTTCATCCTCTCCAAGACCTCACCCCTCAGCGCCACCGAAGCAGCGGCATTCGCCAAACACGCGGCCGCCAACACCCTATCCACAAAGTTACCGGAATTCTGCACCGCCGCGCATCTCTTCTGCTTCCCGGACATAAACCCCAGCCTTAAGAAACTATACCCTTTCGACCCGCTCCATTTCGCTGTCTACAACGTCGACCAGAATTTCACCACCTACGTGTTCGGCGAGAATTTCACCACCTACGGAACACATAAAGCCGATGGAATCGACGCGTTCAAGAATTACTCCATCGGTTTATTCAACGAAGGACACAACGAATTCAAAAGATACAGCAAAAGCTCCGCCAATCACAACGACAGTTTCAAAACCTACGCTATCAACAACAACGCGGCGGCAGAAGACTTCAACAACTACGGAACCAGTTCCGCCGCCGGATCTGGCGAATTCAAAACCTACACTCAAGACAGCAACGTGCCTAACCTGAAATTCAACACTTACACAGCCGACACCGTCGGAAGAGAACAAACATTCACAAGCTACAGCGATTCCGGAAACGCCGGTAACCAGACTTTCACGAACTACGGCAAAGACTCCCTCCATGCTGTTAATGGTTTCACCTCCTACGCAACCGACGCTAATGTATTCAAATCCGAATTCACCGCATATTCGGAAAAAGGCACAAGCAATGAAGATAAATTCACCAGCTACGGTAAGCGCTTGAACAATCCTGACAATAATTTCAAGAATTACGGTAAGGGAAGCACTGGTGCTACCGAGAAATTCACGAGTTACAGAGACGAAGCTAATGCCGGTGGTGATTCGTTCACTTCGTACGGTGAGAATTCACGCGGTGGGATCCACGTCGGTTTCAATAGCTACGGCCAAAGACCCGGTTTCCCGAAATTTCCAGGATTTGATAGTTTTAAAGGCTATGCTAAAGGAGCAGATTTGGATCATAAGGTTACTTTCAAAACTTACGGTGTTAATAACACTTTCAAAGATTACGATAAAAAAGGTATTTCATTTGCTAGATACACTAACGGTTCTTCAACTAACTCTGTTTCTGTTAGTGATAATTCTGTTAAAAATTTGGTTCAACCGGGTAAGTTTTTCCGAGAAATGATGTTGAAAGAAGGAACGGTTATGCCTATGCCGGATATAAGAGATAAATTACCACCAAGGTCGTTTTTGCCTCGTTCCATTTTGTCCAAATTGCCCTTTGCGTCTTCTAAGTTGAACGAAATGAAGCAAGTTTTTAAAGTGTCTGAGAATTCTCCGATGAAGAAGATAATAGTTGATGCGGTGAATGAGTGTGAGAGGGCACCGAGTATGGGCGAAACGAAGCGTTGTGTGGGTTCACTTGAGGACATGATTGACTTTGCGACTTCGGTTTTGGGTCGCGATGTTACGGTTCGATCAACCGAGAATGTAAATGGGTGGGGTAAAAATGTTATGGTGGGTCGGGTTAAAGGGATAAACGGAGGAAAAGTAACGGAATCTGTGTCTTGTCATCAAAGTTTGTTTCCTTCTTTGTTGTACTACTGTCACTCAGTTCCAAAGGTTCGGGTTTATGAAGCGGATCTTTTGGATCCGGAGTCTAAGGCTAAGATTAATCATGGTGTTGCTATTTGTCATTTGGATACAACTGCTTGGAGCCCCACTCATGGTGCGTTCATGGCTCTTGGGTCTGGTCCGGGTCGGATTGAAGTTTGTCACTGGATCTTTGAAAATGATATGACTTGGACTATTGCTGACTGA 1941 0.4441 MKKMQKQFNHIIHTLLILFSIITVGFALNHEKEKHQNPFTPKAFVIRYWDRVIKNNLPKPSFILSKTSPLSATEAAAFAKHAAANTLSTKLPEFCTAAHLFCFPDINPSLKKLYPFDPLHFAVYNVDQNFTTYVFGENFTTYGTHKADGIDAFKNYSIGLFNEGHNEFKRYSKSSANHNDSFKTYAINNNAAAEDFNNYGTSSAAGSGEFKTYTQDSNVPNLKFNTYTADTVGREQTFTSYSDSGNAGNQTFTNYGKDSLHAVNGFTSYATDANVFKSEFTAYSEKGTSNEDKFTSYGKRLNNPDNNFKNYGKGSTGATEKFTSYRDEANAGGDSFTSYGENSRGGIHVGFNSYGQRPGFPKFPGFDSFKGYAKGADLDHKVTFKTYGVNNTFKDYDKKGISFARYTNGSSTNSVSVSDNSVKNLVQPGKFFREMMLKEGTVMPMPDIRDKLPPRSFLPRSILSKLPFASSKLNEMKQVFKVSENSPMKKIIVDAVNECERAPSMGETKRCVGSLEDMIDFATSVLGRDVTVRSTENVNGWGKNVMVGRVKGINGGKVTESVSCHQSLFPSLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHGAFMALGSGPGRIEVCHWIFENDMTWTIAD* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2918 646 ProSiteProfiles BURP domain profile. 431 645 IPR004873 -
Psa4g2918 646 Pfam BURP domain 431 643 IPR004873 -
Psa4g2918 646 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 646 - -
Psa4g2918 646 SMART BURP_2 429 645 IPR004873 -
Psa4g2918 646 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2918 Psa-Chr4 234117937 234120820 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2918 - - var:108321369 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2918 4 234117937 234120820 Psa4g2918 4 234117937 234120820 ECH