Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2916 ATGGAGGAACATCAACAACCACAGAAACTCCCTCTTTCTCTTGACTGGGACACACTCCATGATACGCCGGCGGCGGAACTCGTAGTGAAGGCTCCCGATCAGAAACCTCAGCCTTACGTTGACCTGGACAGTCTCAAAGATTATGAGCTCGAGGACGATATTCGGAGAAAGAAGAAGCTTCTTGAAACCGCCGGTAAAAAATTGCCGGACGGGGGAAGCAAACTTCGCGCTGCCATCGAGTTATATGAAGAGGAGTTTCGTAAACGGAAAATGAACCCCCGTCCTCAGAAAGTTCATGAGGAGCAGAAGCAAGGACAAGCTACTGCCAGCTCAAGTTCTGTTGGTATGTCTAATAACTCTAGAGAAGAGAGTTTGCCATCTCGTCCACAGTCAAAATCCTCTTTTGCATCTTGTTTTATAAAGAAAATGGAAGATAATGCTAGTTGTACAACTGATGATTCATTTAGCAACGAGATGCCACATTTCAAGCATTGCAACAGCCAGGTAGTACGACACAACAGAGAACCTAAAAAAAGAAAGAGGCGTCGATCATCTTTAAGACCGTTGCCATTTCAATTCTCGAGCAAACTTTCAAAACGTGATACTTTTAGTGATAGTGATAAAAGGTGCCGAGCCAATTCTACCTTATCGGTACAGACAATTACAAGGAATCTATCAAGACACTTATCAAAAGATAAGGGTGCATTTCAGGCAGTTCAATCAGATGGTTCAAGGTCCAGGAAGGGTCAGCCCATTGTTCTCGATGATGACGACAGTGACGACAGCGACGATCCTCATGTTTTAGAGAAAACAGAAAACAAAGCTCCTGAATACTTGAAAGATGCTAAGATCTATTTTCCTTCAAGAGATGATCCTGAGTGTGTTGAAGTTTGTTACAACGACATGGAATGCCTTGCTCCTGAAGGTTACTTAACATCAACTATCATGAACTTTTACATTCGATATTTAAAGCAGCAAGTATCTCCTACAATATCAGACTACCATTTTTTCAACACATATTTCTACAAGAAACTTAAAGAAGCTGTTTCCTGCAAGGATAGTAACAACAGAGACACAATATTTGCAAAGTTCAGAAGGTGGTGGAAGGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCAATACACCAGGATCTTCATTGGAGCTTGAGCATTATTTGTTTCCCAGACAAAGAAGATGAATCAGGACCAATAATACTTCATTTGGACTCTTTGGGGCTTCACTCTAGTCGATCAGTTTTTGAAAACATTAAAAGCTATTTGATAAAAGAAAGGAACTATTTGAGTAAGGAATGCGCGTCCTCAGATGTTCCGATTGCAGACAGAATATGGAAGTCTCTTTCTAGTACAATTGAAACTGTAATCATGAAGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTGCTGTACTTCATTAGGCGTTTCATGGAAGAGGCACCCGATCGACTGAAAAAGAAAAATTTAGCAATGTTTAGCAAGAAATGGTTCAAACCTGAAGAAGCATCCAGTTTGAGAGCGAAAATCCACAAGTTGCTTGTAGCAGAACTACACAGTTCAGTCAAGCCTGATGGTATCAATGAGTCATCCCCTTCATCTGCTGGCGATGCAATCGAATGCAATGAGACTGCCAAGGACTCTTCCTCTTCATCTGCTGGCGCTGCAACCGAATGCGATGAGACTGCCAAGGACTCTTCAATCAAAGATGGCATCACGAGTTGTGATTCTCTCATGATTGAATGA 1773 0.4151 MEEHQQPQKLPLSLDWDTLHDTPAAELVVKAPDQKPQPYVDLDSLKDYELEDDIRRKKKLLETAGKKLPDGGSKLRAAIELYEEEFRKRKMNPRPQKVHEEQKQGQATASSSSVGMSNNSREESLPSRPQSKSSFASCFIKKMEDNASCTTDDSFSNEMPHFKHCNSQVVRHNREPKKRKRRRSSLRPLPFQFSSKLSKRDTFSDSDKRCRANSTLSVQTITRNLSRHLSKDKGAFQAVQSDGSRSRKGQPIVLDDDDSDDSDDPHVLEKTENKAPEYLKDAKIYFPSRDDPECVEVCYNDMECLAPEGYLTSTIMNFYIRYLKQQVSPTISDYHFFNTYFYKKLKEAVSCKDSNNRDTIFAKFRRWWKGVNIFQKAYVLIPIHQDLHWSLSIICFPDKEDESGPIILHLDSLGLHSSRSVFENIKSYLIKERNYLSKECASSDVPIADRIWKSLSSTIETVIMKVPQQKNEYDCGLFVLYFIRRFMEEAPDRLKKKNLAMFSKKWFKPEEASSLRAKIHKLLVAELHSSVKPDGINESSPSSAGDAIECNETAKDSSSSSAGAATECDETAKDSSIKDGITSCDSLMIE* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2916 590 MobiDBLite consensus disorder prediction 232 272 - -
Psa4g2916 590 Pfam Ulp1 protease family, C-terminal catalytic domain 310 511 IPR003653 GO:0006508|GO:0008234
Psa4g2916 590 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 41 543 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 86 133 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 86 101 - -
Psa4g2916 590 Gene3D - 334 463 - -
Psa4g2916 590 SUPERFAMILY Cysteine proteinases 286 524 IPR038765 -
Psa4g2916 590 Gene3D - 286 524 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 534 566 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 102 133 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 166 192 - -
Psa4g2916 590 MobiDBLite consensus disorder prediction 534 576 - -
Psa4g2916 590 PANTHER UBIQUITIN-LIKE PROTEASE 4 41 543 - -
Psa4g2916 590 ProSiteProfiles Ubiquitin-like protease family profile. 295 486 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2916 Psa-Chr4 233979892 234002641 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2916 K16287 - gmx:100790705 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2916 4 233979892 234002641 Psa4g2916 4 233979892 234002641 ECH