Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2914 ATGGCTCATTTTCATAACCAACAAAACCTACTCTTTTCATTTCTACTAATCCTTTCCTTAACAACATTGGTTTCTGTTTCTTCACACAGCAGGCCTTACACAATTCCATCTGTCTCACACTTAACCGATTCTTTTCCTCATGTCACAATTCAAACCGCTTTTTCTAATGCTTTTGGTGCCTCAAATGTTAAGTTTCTTAGTAATGGGTCCATGGCCACCCTGGCTCTTGACAAAATCACAGGTTCTGGAATGGTGTCACAAAATAGATACTACTATGGATTCTTTAGTGCTGCGATCAAATTACCAGCTGGTTTGTCACCTGGAGTTGTGGTTGCTTTTTATTTGTCAAATGCAGATAAGTTTCCTCACAACCATGATGAGATAGATATTGAAATTCTTGGTCATGACAAGAGAAATGATTGGGTTATTCAAACAAACGTGTATGCCAATGGAAGTGTTAGCACAGGAAGAGAAGAGAAATTTTATTTCTGGTTTGATCCAACAGAGCAGCACCATTATTATAGCATCTTGTGGAATAGTTATCACACTGTGTTTTTTGTTGACAATATTCCAGTGAGGGAATTCATACACAAAAACACATACCCATTTATTTATCCATCAAAACCAATGTCATTATATGCAACAATATGGGATGGTTCAGAATGGGCTACACATGGAGGAAAGTACCCTGTAAACTACAAATATGCACCATTTGTTGTTTCATTTACTGAAATGGAATTAAGTGGCTGCATAACTGATCCAAATTCACCAACTTCTTCATGTTCTAAGTCAAATCCTTTAGGACAACAAGACCCTATTAATGGAGCAGAGTTTAGCAAGCTCTCACAACAACAGATTGCAGCTATGGATTGGGCTAGAAGGAAACTCATGTTTTATTCTTATTGTAATGATGTATCTAGATACAAAGTCTTGCCAGCAGAATGTCACTAA 951 0.3712 MAHFHNQQNLLFSFLLILSLTTLVSVSSHSRPYTIPSVSHLTDSFPHVTIQTAFSNAFGASNVKFLSNGSMATLALDKITGSGMVSQNRYYYGFFSAAIKLPAGLSPGVVVAFYLSNADKFPHNHDEIDIEILGHDKRNDWVIQTNVYANGSVSTGREEKFYFWFDPTEQHHYYSILWNSYHTVFFVDNIPVREFIHKNTYPFIYPSKPMSLYATIWDGSEWATHGGKYPVNYKYAPFVVSFTEMELSGCITDPNSPTSSCSKSNPLGQQDPINGAEFSKLSQQQIAAMDWARRKLMFYSYCNDVSRYKVLPAECH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2914 316 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 316 - -
Psa4g2914 316 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 315 IPR013320 -
Psa4g2914 316 Pfam Glycosyl hydrolases family 16 54 234 IPR000757 GO:0004553|GO:0005975
Psa4g2914 316 Gene3D - 35 315 - -
Psa4g2914 316 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 43 242 IPR000757 GO:0004553|GO:0005975
Psa4g2914 316 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 316 IPR044791 GO:0004553
Psa4g2914 316 PIRSF EndGlu_transf 8 316 IPR016455 GO:0010411|GO:0016762|GO:0042546
Psa4g2914 316 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 279 315 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2914 Psa-Chr4 233881700 233884336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2914 10 316 Glycoside Hydrolase AT1G10550 60.968 4.35e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2914 K08235 - gmx:100778993 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2914 4 233881700 233884336 Psa4g2914 4 233881700 233884336 ECH