Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2911 ATGACTAAGCAGTTTCTGTTACTATCTCTCATTCTTCACCTTCTCTCTGGATCACTCTCAGTCTCAGCTCCACCATCTACATCTTCACCTGCAAAACTTTTTTCCGGGTTTCTCTCCAATGCTGTCCCTGCTTTTACCAAATGGGTCTGGTCTCTTAAAGCCACCACTAAAACTGGGGTTTTGAGCAAGTCAATGATGAAATTTGAGAGTGGTTACAATGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCTGTTGAGGTTTTGCATAATGGGGAGCTTCTCATTCTAGATTCTGCTAATAGTAACCTTTATAGAATCTCCTCATCACTCTCTTTGTATAGCAGACCAAAGCTGGTGGCTGGATCAGCGGAAGGATACTCTGGCCATGTTGATGGGAAGCTCAGGGATGCTCGGATGAACCACCCGAAAGGGATAACTATTGATGACCGAGGAAATATTTATGTTGCAGATACTACAAATATGGCAATTAGGAAAATTAGCGATTCAGGGGTCACAACAATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGACATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGACGACTTCGATGTGGTTTATGTTGGAAGTAGTTGTTCCCTACTCGTTGTAGACAGAGGAAACCAAGCCATCAGGGAGATCCAACTCCACTTTGATGATTGCGCGTATAGATATGGAAGTGATTTCCCTCTTGGAATCGCAATGCTTGTTGGGGCTGGCTTCTTTGGCTATATGCTGGCACTGCTGCAGCGTAGGCTCGGTACAATTGTAGAATCTCAGGATGCTCAGGTTCCGGTAACAGTAATGCCTTCCGCTTCTCCAAGTACGTATCAAAAGCCCTTGAAATCCGTCCGGCCTCCTTTAATTTCGTCAGAATATGAACCCGAAAAGCAGGAAGAAGGCTTCTTTGGATCTCTTGGGAAGCTTCTTTCCAATGCTGGTGCATCAATGGTGGAGATAATGGGAGGATTATTTCCTGTTTTCAGAAGAAGACCACAGAACTCACAATACCATAGAGAAACACTGATCCAACAACCTCAGAAGCTAGTGAATGATTGGCCAGCACAGGAAAGTTTCGTGATTCCTCGCGAAGATGAACCACCGTCTATTGACACCAGGGCCCCAACGCCTCAAAAAACCTATCCTTTCATGTCGAAAGATGCAGAAAAAATTAAACAATTGCGGCAAATGCAGGAACAAGAGGGGAAGAAGGAATCTGTAATCATCACACCGGTTGAATATGGAGGCTCATTGTACGAACATCGCAATATTCGGCCTCGGATGAGTTCCATGGGTTATACTTACACTCATAACTACTGA 1362 0.4457 MTKQFLLLSLILHLLSGSLSVSAPPSTSSPAKLFSGFLSNAVPAFTKWVWSLKATTKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYAVEVLHNGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLRDARMNHPKGITIDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVVDRGNQAIREIQLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALLQRRLGTIVESQDAQVPVTVMPSASPSTYQKPLKSVRPPLISSEYEPEKQEEGFFGSLGKLLSNAGASMVEIMGGLFPVFRRRPQNSQYHRETLIQQPQKLVNDWPAQESFVIPREDEPPSIDTRAPTPQKTYPFMSKDAEKIKQLRQMQEQEGKKESVIITPVEYGGSLYEHRNIRPRMSSMGYTYTHNY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2911 453 SUPERFAMILY NHL repeat 73 231 - -
Psa4g2911 453 Gene3D - 38 229 IPR011042 -
Psa4g2911 453 PANTHER - 1 411 - -
Psa4g2911 453 PANTHER - 411 450 - -
Psa4g2911 453 PANTHER NHL REPEAT PROTEIN 1 411 - -
Psa4g2911 453 PANTHER NHL REPEAT PROTEIN 411 450 - -
Psa4g2911 453 Pfam NHL repeat 145 170 IPR001258 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2911 Psa-Chr4 233466563 233469196 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2911 - - mtr:MTR_8g063760 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2911 4 233466563 233469196 Psa4g2911 4 233466563 233469196 ECH