Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2904 ATGGCTCGGGTTTATATTGGGAATTTGAACCCTCGAATCACTGAGAGGGAACTTGAAGATGAGTTTCGTTTTTACCGTGTTCTCCGGAGTGTATGGGTTGCTCGTAGACCACCAAGATATTCATTTATCGAGTTTGATGACCGGAGGGATGCCCTTGATGCAATTCATGCTTTGGATGGAAAAAATGGCTGGCGTGTAGAGCTTTCTCATAATTCTAAGAGTGGAGGAGGAGGCCGTGGTGGTGGGAGTGCCGTTCACGCGGTGGATCACGAGGCCTGGGAAGTGGAAGGAGGCGCAGTCCTAGTTATGGTTACGGCCGCAGCTACAGCAGGTCCCCTCCATACCGTTATTCTTGCCGTGATTCACCTTATGCCAATGGAGATTAAAATCGGAATGTGA 399 0.4937 MARVYIGNLNPRITERELEDEFRFYRVLRSVWVARRPPRYSFIEFDDRRDALDAIHALDGKNGWRVELSHNSKSGGGGRGGGSAVHAVDHEAWEVEGGAVLVMVTAAATAGPLHTVILAVIHLMPMEIKIGM* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2904 132 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 83 - -
Psa4g2904 132 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 61 IPR000504 GO:0003723
Psa4g2904 132 SMART rrm1_1 3 69 IPR000504 GO:0003723
Psa4g2904 132 CDD RRM_SRSF3_like 3 71 - -
Psa4g2904 132 SUPERFAMILY RNA-binding domain, RBD 3 75 IPR035979 GO:0003676
Psa4g2904 132 Gene3D - 2 69 IPR012677 -
Psa4g2904 132 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1 2 83 - -
Psa4g2904 132 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2904 Psa-Chr4 232176866 232178333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2904 K12896 - nnu:104593238 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2904 4 232176866 232178333 Psa4g2904 4 232176866 232178333 ECH