Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2887 ATGCATAAACTCACACTCTTTCTCTTTTGTCTCATTTTCTCCGCACTCGCCGTTAGTTTTGCGGATCATGCAGACAAAACACAAAAAAATCCATTCACTCCAAAAGCATTTGTGATTCGCTATTGGGACAGAGTGATCAAAAACAACCTGCCAAAACCATCCTTCATCATTTCCAAGGCGTCGCCACTTAGCGCAGCAGACGCAACCGCTTTTGCCAAACACATAGCTGACAACACACTGTCCACAAAGTTGCCGGAATTCTGCTCAGCCGCACACCTCCTTTGCTTTCCTGATGTAAATCCTAGCCTTGCAAAACACTCTCAGGACTCCAAATTCACTGTCTACAACGAAGGTAACAACTTCACCAACTATGGAACAGAGAGACCAGGAGGACTAGATTCATTCAAGAACTACTCCAACGGTTTCGAAAGCAACCCGATCAACGAATTCCGCCAATACAGCCGCAGTTCCGCTGGCCACAACGACAGTTTCATCAACTATGCTGACTCAACCAACGTCGCAGATCAGAATTTCAACACCTACGGTTCTGCCGCCGCTGGTGGCGTCGGGGAATTCAAAGCATACGCTAAAGAAACCAACGTCCCTAACCTCAGGTTCTCCACTTACTCCGTCTCTACCGCCGGCAGACAACAGAAGTTCTCAAGCTACAGCGAAGACGGAAACGCCGGCGGTCAGGTTTTTGGTAACTACGGGAAAGACTCCGCAGGTGCCGAAAACCGTTTCACACAATACGGAACGGACTCTAACGTTGCTTCATCAGGTTTTTCTAGTTACGCGGACAAAGGCACAGGTAATAAAGACACTTTCGTTAGTTACGGCTTTAATATGAATAATCCTACTGTGGATTTCAAAAACTACGCCAGAGGAGGTTTAGGAGTCACTGAGAAGTTCTCAAGTTATAGAGATCAATCCAATGTTGGTGCTGATTCGTTTACTTCTTACGCTAAGGATGCAGAAACTGGGACCCATGTTGATTTCAATAACTATGGAAAATCTTTTAACGAAGGAACCGACACTTTCAAAGGCTATGCTAAAGGTGCAGGTGCAGATCATAAAGTTACTTTCAAAAGTTATGGTGTGAATAACACTTTCAAGGATTACGATAAAAAAGGTATTTCTTTTGCCCAATATACTAACGCTTCTGCAACTAATGCTGTTTCTGTTAGTAATAGTTTGGCAAAGAAATGGGTTGAACCGGGTAAGTTTTTCCGGGAAATGATGTTGAAACAAGGTGTGGTAATGCCTATGCCTGATATCAAAGATAAGTTACCAAAAAGATCGTTTTTGCCTCGTAACATTTTCACTAAATTGCCCTTTGCAACTTCGAAGATGAATGAGTTGAAGCAAGTTTTTAAAGTGTCTGAGAATTCGTCAATGGATAAAATGATAGTGGACTCGTTGGGTGAATGTGAGAGGGCTCCGAGTAAGGGCGAGACGAAACGGTGTGTAGGATCACTCGAGGACATGATCGACTTTGCAACTTCGGTATTGGGCCATGATGTTACGGTTCGGTCCACGGAGAATTTAAATGGGTCGGGTAAAAATGTCATGGTGGGTCGGGTTCAAGGGATAAACCATGGAAAAGTGACTAAATCAGTTTCATGTCATCAGAGTTTGTTTCCTTCTTTGTTGTACTATTGTCACTCAGTTCCGAAGGTTCGGGTTTATGAGGCGGATCTTTTGGACCCGGAATCAAAGGCCAAGATTAATCACGGTGTTGCGATTTGTCATTTGGATACAACTGCTTGGAGCCCCACCCATGGTGCATTCATGGCTCTTGGGTCTGGTCCGGGTCGAATTGAAGTGTGCCATTGGATCTTTGAGAACGATATGACTTGGACTACTACGGACTAA 1875 0.4427 MHKLTLFLFCLIFSALAVSFADHADKTQKNPFTPKAFVIRYWDRVIKNNLPKPSFIISKASPLSAADATAFAKHIADNTLSTKLPEFCSAAHLLCFPDVNPSLAKHSQDSKFTVYNEGNNFTNYGTERPGGLDSFKNYSNGFESNPINEFRQYSRSSAGHNDSFINYADSTNVADQNFNTYGSAAAGGVGEFKAYAKETNVPNLRFSTYSVSTAGRQQKFSSYSEDGNAGGQVFGNYGKDSAGAENRFTQYGTDSNVASSGFSSYADKGTGNKDTFVSYGFNMNNPTVDFKNYARGGLGVTEKFSSYRDQSNVGADSFTSYAKDAETGTHVDFNNYGKSFNEGTDTFKGYAKGAGADHKVTFKSYGVNNTFKDYDKKGISFAQYTNASATNAVSVSNSLAKKWVEPGKFFREMMLKQGVVMPMPDIKDKLPKRSFLPRNIFTKLPFATSKMNELKQVFKVSENSSMDKMIVDSLGECERAPSKGETKRCVGSLEDMIDFATSVLGHDVTVRSTENLNGSGKNVMVGRVQGINHGKVTKSVSCHQSLFPSLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHGAFMALGSGPGRIEVCHWIFENDMTWTTTD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2887 624 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 2 623 - -
Psa4g2887 624 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 2 623 - -
Psa4g2887 624 ProSiteProfiles BURP domain profile. 409 623 IPR004873 -
Psa4g2887 624 Pfam BURP domain 409 621 IPR004873 -
Psa4g2887 624 SMART BURP_2 407 623 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2887 Psa-Chr4 231037094 231039921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2887 - - gmx:100779518 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2887 4 231037094 231039921 Psa4g2887 4 231037094 231039921 ECH