Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2881 ATGTGCATCAGCACTAATATTAATACCCAGCTCTCTCTTTGCGACCCATCATCCACAATCACTTTCTCTTTTCTGTTCATTCATTTTAAAATCAAAGACATGGCAGGAGATTCATATGAGGAGGCTATTGCAAACTTGACGAAGCTTCTAAGGGTGAACACTGATTTCACAGATTTCGCCACCGCAAAAATCAAGCAGTTGACGACGGAGCTGGTGGCTGCTGAGTTGGAGCCTTTTAACCCAGATGAGAGGATTCGAACTGGATTCAACCGTTTCAGGAATGAAAATTTTCGGCAAAATCTAGAATTATATAGTCAACTTGCCAAAGGCCAGAACCCAAAGTTTCTGGTTTTTGCTTGTTCAGACTCAAGAGTTTGCCCATCCCATATTCTGGATTTCCAACCTGGTGAAGCCTTTGTTGTCAGAAACATTGCCAACATGGTTCCACCATATCACAAGACCAAGCATTCAGGAACAGGAGCTGCCATTGAATATGCGGTCATACATTTAAAGGTGGAGAATATTGTTGTCATTGGACACAGCAGTTGTGGAGGTATAAAGGGCCTCATGTCTATCCCAGATGATGGGACCATTGTAAGTGATTTCATAGAACATTGGGTCCAAATTTGTAGTGCAGCAAAGTCCAAAGTTAAAGAAGAAGCAAACGAATTAGATTTCTCTGAGCAGTGTACCAACTTGGAGAAGGAAGCTGTTAACGTATCTCTTGGGAATTTACTGACTTATCCATTTGTGAGAGAAGCAGTTGTGAAGAAAACTTTGGCTTTAAAAGGTGCACATTATGATTTTGTTAAGGGAGCATTTGAGCTTTGGGATATAGAGTTCAAAATTTCATCCTCACTGTCCTTTTAA 870 0.408 MCISTNINTQLSLCDPSSTITFSFLFIHFKIKDMAGDSYEEAIANLTKLLRVNTDFTDFATAKIKQLTTELVAAELEPFNPDERIRTGFNRFRNENFRQNLELYSQLAKGQNPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYHKTKHSGTGAAIEYAVIHLKVENIVVIGHSSCGGIKGLMSIPDDGTIVSDFIEHWVQICSAAKSKVKEEANELDFSEQCTNLEKEAVNVSLGNLLTYPFVREAVVKKTLALKGAHYDFVKGAFELWDIEFKISSSLSF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2881 289 Coils Coil 57 77 - -
Psa4g2881 289 Pfam Carbonic anhydrase 116 273 IPR001765 GO:0004089|GO:0008270
Psa4g2881 289 SUPERFAMILY beta-carbonic anhydrase, cab 83 283 IPR036874 GO:0004089|GO:0008270
Psa4g2881 289 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 164 184 IPR015892 GO:0004089|GO:0008270|GO:0015976
Psa4g2881 289 CDD beta_CA_cladeB 88 277 IPR045066 GO:0004089|GO:0008270
Psa4g2881 289 PANTHER CARBONIC ANHYDRASE 34 289 IPR001765 GO:0004089|GO:0008270
Psa4g2881 289 PANTHER CARBONIC ANHYDRASE 34 289 - -
Psa4g2881 289 SMART Pro_CA_2 108 278 IPR001765 GO:0004089|GO:0008270
Psa4g2881 289 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 120 127 IPR015892 GO:0004089|GO:0008270|GO:0015976
Psa4g2881 289 Gene3D Carbonic anhydrase 72 289 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2881 Psa-Chr4 230327234 230340988 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2881 K01673 - gmx:100808326 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2881 4 230327234 230340988 Psa4g2881 4 230327234 230340988 ECH