Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2878 ATGCAGAAAACAAACATAAATGTTGAGATGTTAAGAGTGAAAGCATTATCAATTCTATGCACACCTTACCCTTTCCTTGATTTTCATGGGTTAGATCCTATTCCAGATAAAGTAGATCCAGAATGTAGCATAAAACAAGATATAAGCGGTGACAAATTTATTGATTTTGATGAGTTTTCTTCCAATCGAGATAATCTTGATCCATATTGTAACACAAACCAGAAAATTAACAATGATACTTCTTTAGATTTGGAAGGCTTCACTCCCTTTGAAGGTAAAATTGATTTATGTTGTAGCACCAAACAAAAAATTCACAACAATGATGAAGAAAACATTGACGAACAAGTGTTTAGTTTTCCGGACGCTAATTTCCAAGGTATACGAATATTTGCCGATGATTTAATTGAAAATGGAAAACTAAGAACATTACTTCCTCATTTTGACCAATCTCGTTTTGACACTTCCACTCCAAACAATGTTGCCTCACATATTCGACCACCTCTAAAGAAGATCTTTATTAATAATTCCATTAATGGAAAACTAAGAACATTACTTCCTCATTTTGACCAATCTCGTTTTGACACTTCCACTCCAAACAATGTTGCCTCACATATTCGACCACCTCTAAAGAAGATCTTTATTAATAATTCCATAAGTCAACAATCAAGACCAGATGGTAATTCTAAAGAAACTCAAAATGAGTTTCTAGAAAATATAACATCGGTTGAGATGTTGGAGTCAAAGGAGCATTGCAAAAAATGCAACTCCACAGGGTCATCAAATTTATGGAGGTTTAGGCAAAACATGGATCTCAGATGTAATAGTGACAATAGGGATTCTTTAGTGATATTGAATTCTTCGATGCCAAAAAATCATTTCAAGACAAAAGTAGAAAGCATCGTCATTAAAAAAAGGAAGGAAGAACAACCCAATAAGGCATTATCGACATACGAGAAGCTTTATTTGAAAAATAAAAAGAGGAAGGGAAGCAAAAAGCAAAGATCATTTTTGCCATATAAACACCAATTATTTGGGTTCTTTACGAACATGAATGGATTAAGCAGGAACCTGCACCCCTTTTAA 1083 0.3361 MQKTNINVEMLRVKALSILCTPYPFLDFHGLDPIPDKVDPECSIKQDISGDKFIDFDEFSSNRDNLDPYCNTNQKINNDTSLDLEGFTPFEGKIDLCCSTKQKIHNNDEENIDEQVFSFPDANFQGIRIFADDLIENGKLRTLLPHFDQSRFDTSTPNNVASHIRPPLKKIFINNSINGKLRTLLPHFDQSRFDTSTPNNVASHIRPPLKKIFINNSISQQSRPDGNSKETQNEFLENITSVEMLESKEHCKKCNSTGSSNLWRFRQNMDLRCNSDNRDSLVILNSSMPKNHFKTKVESIVIKKRKEEQPNKALSTYEKLYLKNKKRKGSKKQRSFLPYKHQLFGFFTNMNGLSRNLHPF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2878 360 PANTHER DUF1645 FAMILY PROTEIN 1 179 - -
Psa4g2878 360 PANTHER DUF1645 FAMILY PROTEIN 178 357 - -
Psa4g2878 360 PANTHER - 1 179 - -
Psa4g2878 360 PANTHER - 178 357 - -
Psa4g2878 360 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2878 Psa-Chr4 230177466 230179586 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2878 - - mtr:MTR_8g064650 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2878 4 230177466 230179586 Psa4g2878 4 230177466 230179586 ECH