Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2848 ATGAAGCAATTTCTGATGCGGTCTTACTATGACAGATATACGAGCTTACATGATTCAGATTTTGAAATTTTCATGTCTCAAGAAGTCGCTTCTGGTCTGTGCAAAGTGCTTCCTGAAAACCATAATTCCATGTTAAGATTGTCAGTTCTAAGACGCGATCTTGTTGGTGAAGGTTCTCACCGCCGTGTGTCTACATTAATCAAATTACAAACCCAACAGTTGAAGTCTTTGTCTGATCTTTTAAGCTACTCATGTGAATTAATAATTATTGAAAGACTTCCTTCTGGAGTTTTTGCTGATCCATTTGAATTACAACATCTTGCTCAACGTGGTGTGTTCAATGATATAGCTGTCTTTGGTGATACAAATCTCGAGTTACCTTCGTTCTTGTCCAATCGTTCTGCCGTTGAAATCCACTTAGATATTGATCCAAATACATTGCTACAACCAACTGATATCAGCATAGAGTATCCTTTGCATGCACGATATCAACCTCTGAATGAAAGTGGCTACTCAATAGTCGAATTTGGTGCACCAGATACATTACTGCGCTGCCGCGTGAAGGAAAAGATGGAAAATAGCAATTGCTTGTTCAAATTGAAAAATGATGATGCCAATCTGTATGATGCTGGTCTTGTTTGGAGAATACCATCTGGAAAAAAGGCGCATTCTGATCTTGTTTCAACCGTTACATTTCTTACAGCCTTCTTATCAACTCTTGTAATTATGGTAACATCATTGCGTTATTTTAATAGCAGAGTGAGTAAAGATTTGAAACAATCATAA 786 0.374 MKQFLMRSYYDRYTSLHDSDFEIFMSQEVASGLCKVLPENHNSMLRLSVLRRDLVGEGSHRRVSTLIKLQTQQLKSLSDLLSYSCELIIIERLPSGVFADPFELQHLAQRGVFNDIAVFGDTNLELPSFLSNRSAVEIHLDIDPNTLLQPTDISIEYPLHARYQPLNESGYSIVEFGAPDTLLRCRVKEKMENSNCLFKLKNDDANLYDAGLVWRIPSGKKAHSDLVSTVTFLTAFLSTLVIMVTSLRYFNSRVSKDLKQS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2848 261 Pfam PIG-X / PBN1 58 244 IPR013233 GO:0005789|GO:0006506
Psa4g2848 261 SMART pig_x_1 55 249 IPR013233 GO:0005789|GO:0006506
Psa4g2848 261 PANTHER PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN 8 260 IPR040039 GO:0006506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2848 Psa-Chr4 227687920 227691141 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2848 K07541 - gmx:100792914 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2848 4 227687920 227691141 Psa4g2848 4 227687920 227691141 ECH