Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2825 ATGGCATTGAGCAACAATGTCATAGGAATCATAAACTTCATTGCAGTACTCCTCTCAATCCCTATCATAGGTGCTGGAATTTGGCTAACAACATTACAAGCAGAATCATGTGTCAAAATCCTACAATGGCCAGTGATCATTTTAGGGATACTAATTTTCATTGTTGCAATGGTAGGGTTGGTTGGAGCCTTTTGGAGGATACCGATGCTTCTTATATTCTACCTTATTGCAATGATTGTGCTCATTGTATTGTTGGTTTCTTTGGTGATTTTTGTTTATTTTGTCACACTTAGAGGACATGGAAATATTGAACCTAATAGGTCATATTTGGAGTATCATGTGAATGATTTTTCAATTTGGCTAAGAAGAAGGGTTAGAAGTTCACATAAGTGGGATGGAATAAAGAGTTGCCTTAGTTCATCAAGTATTTGTGCTGAGTTGAATCAAAGTTATCGGTTGCCTCAAGATTTCTTTAATGCACACCTATCACCCTTGCAGTCAGGGTGTTGCAAACCACCAACAAAATGTGGCTACACATTTGTGAACCCAACTTATTGGATTAGTCCAATCAACAATGGTGAAGACATGGATTGCATGAAATGGAGCAATGATCAAACACAACTTTGCTACAATTGTGACTCATGCAAAGCTGGTTTATTAGCAACACTTAGAATAGATTGGAGAAAAGCCAATGTGATATTGATTGTTACATTGGTTGGTTTAATTGTTGTTTATTTGTTTGGGTGTTTTGCCTTTAGGAATGCCAAAACTGAGGAGCTTTTTCGCAAATACAAGCAAGGATACACTTGA 810 0.3704 MALSNNVIGIINFIAVLLSIPIIGAGIWLTTLQAESCVKILQWPVIILGILIFIVAMVGLVGAFWRIPMLLIFYLIAMIVLIVLLVSLVIFVYFVTLRGHGNIEPNRSYLEYHVNDFSIWLRRRVRSSHKWDGIKSCLSSSSICAELNQSYRLPQDFFNAHLSPLQSGCCKPPTKCGYTFVNPTYWISPINNGEDMDCMKWSNDQTQLCYNCDSCKAGLLATLRIDWRKANVILIVTLVGLIVVYLFGCFAFRNAKTEELFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2825 269 PRINTS Transmembrane four family signature 6 29 - -
Psa4g2825 269 PRINTS Transmembrane four family signature 38 64 - -
Psa4g2825 269 PRINTS Transmembrane four family signature 65 93 - -
Psa4g2825 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Psa4g2825 269 Pfam Tetraspanin family 6 249 IPR018499 GO:0016021
Psa4g2825 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2825 Psa-Chr4 225954767 225956776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2825 1 269 Miscellaneous Gene Families AT5G46700 68.030 3.08e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2825 - - gmx:100789266 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2825 4 225954767 225956776 Psa4g2825 4 225954767 225956776 ECH