Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2697 ATGAAGTTTATGAAACTAGGTTCTCGTCCAGATACCTTCTACACTACAGACTCAATAAGGTCAATTTCTTCTGATGTTTCAAGTGACATCATAATTCAAGTTAAAGGAACTAGATATCATCTTCATAAGTTTCCATTGTTATCAAAATGTTTGCATCTACAAAGATTGTGTTCGGAGTCACTTGATTTGTCGTCGAATTGTCAGATAGTACAATTACCCGATTTTCCGGGTGGAGTTGAGGCGTTTGAACTCTGCGCGAAATTCTGCTATAGGATTACAGTTACTATAAGTCCTTACAACATTGTAGCTGCAAGATGTGCCGCGGAGTATTTGCAAATGACGGAAGATGCGGATAAGGGTAACTTGATCTATAAGCTTGAGGTTTTCTTTAATTCGTGCATACTTTACGGTTGGAAAGATTCGATTGTGGCGCTACAAGCGACGAAAGCGTTGCATTTGTGGTCGGAGGAGTTGTCGATTACGAATAGATGCATTGGAGCTGTTTGTTCAAAGGTCTTGAGAAAGGTTTGCAATGATGATGATGATGTGTCTTGTAGTGGAGTAGAAAGTTCGAGAGAACAATCGATGAGAAAAAGATGGTGGGGTGAAGATTTAGCAGAATTGAGCATTGATCTTTATTGGAGAATCATGATTGCTTTAAAGTCTGATGTAAGGATGCCGCTAAATCTCATTGGCGATGCTTTGATAATTTATGCATCTAGATGGTTACCGAAAATCGGCTCTGATTCTGATTCAGCAAGTGAAATGGCTTCTTCGAAGAAGAGTTTGGTTTTGGAATCGATAGTGAATCTGCTTCCGGGTGAAAAAGGCGCTGTTTCGTGTAGCTTTCTGATTAAACTACTGAAAGTAGCGAATGTTTTGAGTTCGTCTTTGTCTTCGAAGACAGAGTTAGTTAAAAGAGCAGGACTTCAATTGGAGGAAGCAACAGTTAATGACCTTCTACTGGTTGGTGATGTGGATCTGGTGATGAAATTGTTGGAAGAGTTTATGTTGCAATTAGGTCAAAGTCCGCCGACTAGTCCTGTAAGATCGAGGTTGGAATTTGATAAAAGGAGGTCACGTTCAGCTGAGGATGTTGGTTTTGAATTGCAAGAGAGTAGAAGATCTTCATCAGCATCGCATAGTTCGAAATTGAAAGTGGCGAAGCTTGTTGATAGGTATCTTCAAGAGGTAGCTAAGGATGTGAATTTGCCTCTTGAGAAGTTCGTCACTATTGCTGAAGGTGTACCGGAATTCGCAAGATTTGATCATGATGATCTGTATAGTGCAATTGATACTTATCTCAAGGCTCATCCAGAACTCAACAAGACCGAACGGAAAAGATTATGCCGAGTTTTAGACTGCAAAAAACTGTCCATGAAATCATGTACGCACGCTGCACAGAACGATTTATTACCACTAAGACTCGTTGTCCAGGTTCTCTTCTTTGAGCAAGCTAGAGCATCAGCATCAGATGGCAAACTCACCAAAATGCCAAGTAACATCAAAGCATTACTCACTGCTTACGGAATCGATCCATCGACACATGCAGCACAATTAAGCACAACTACAAGCATAAACACTGATGAGAGTTGGAATGCTAATTCATTCAAGGCACCAAAATCAACAAAGAACTCAACTCTTAGGATGAAAATAGATGAGGATGATTTCGACGAGAGTAGCGATGTGGTATGCGATGGATTCGGAAGAAATTCTAGATTTAAAGGTTTTTGTTCTCATCCTACTAAGCCTAAACGAATGTTTAGTAAGTTTTGGTCTACCAATGGCAACACAACTCAAAAGAATTGA 1809 0.3997 MKFMKLGSRPDTFYTTDSIRSISSDVSSDIIIQVKGTRYHLHKFPLLSKCLHLQRLCSESLDLSSNCQIVQLPDFPGGVEAFELCAKFCYRITVTISPYNIVAARCAAEYLQMTEDADKGNLIYKLEVFFNSCILYGWKDSIVALQATKALHLWSEELSITNRCIGAVCSKVLRKVCNDDDDVSCSGVESSREQSMRKRWWGEDLAELSIDLYWRIMIALKSDVRMPLNLIGDALIIYASRWLPKIGSDSDSASEMASSKKSLVLESIVNLLPGEKGAVSCSFLIKLLKVANVLSSSLSSKTELVKRAGLQLEEATVNDLLLVGDVDLVMKLLEEFMLQLGQSPPTSPVRSRLEFDKRRSRSAEDVGFELQESRRSSSASHSSKLKVAKLVDRYLQEVAKDVNLPLEKFVTIAEGVPEFARFDHDDLYSAIDTYLKAHPELNKTERKRLCRVLDCKKLSMKSCTHAAQNDLLPLRLVVQVLFFEQARASASDGKLTKMPSNIKALLTAYGIDPSTHAAQLSTTTSINTDESWNANSFKAPKSTKNSTLRMKIDEDDFDESSDVVCDGFGRNSRFKGFCSHPTKPKRMFSKFWSTNGNTTQKN* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2697 602 PANTHER OS12G0117600 PROTEIN 1 598 IPR043454 -
Psa4g2697 602 Pfam NPH3 family 200 463 IPR027356 -
Psa4g2697 602 ProSiteProfiles BTB domain profile. 28 98 IPR000210 GO:0005515
Psa4g2697 602 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 598 - -
Psa4g2697 602 Gene3D Potassium Channel Kv1.1; Chain A 15 119 IPR011333 -
Psa4g2697 602 SUPERFAMILY POZ domain 23 115 IPR011333 -
Psa4g2697 602 ProSiteProfiles NPH3 domain profile. 199 487 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2697 Psa-Chr4 214386478 214389546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2697 24 485 EF-hand Containing Proteins AT3G44820 34.247 1.05e-82 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2697 - - gmx:100798413 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2697 4 214386478 214389546 Psa4g2697 4 214386478 214389546 ECH