Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2650 ATGCCGAGACCGTGGACCGGAAAAGCGCCGTTGAAGAAGTCGAAGAAGAATATTCCTCTTTTTGATTCGTTTAATCCTCCGCCTCCTGGTACGAAAGGAGTTAAGCATGTTGAAATGCCGGGTCCTTTTCCGATTGGGAAGTTTCCAGAAGAAGGAATGAGTAGAAAAGAGATACTTGGGGAGCCTCTTAAGAAGTGGGAGATACAAATGCTTATTAAACCTATGGTGTCTGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACAATCGCATTGGAAGCGTTGCCGTGTCTGTAAAATTCGTTGTAAAGGGGTTCCTACTGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGTTGGTGGCGTAGTTTATCTTTTCCGTGGAAGAAATTACAACTACCGTAGTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTATATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACAAAAGCTGAAGCAGATGAATTAAGGATGAAAGGGAAAAGTTTGTTGCCAATATGCAAATTAGTCAAAAATGGAGTATACACAACACTTGTAAAGGATGTCAGAGATGCGTTTGAAGGAAGCCATTTGGTGAAGATTGACTGCAAACTATTGGATCCTAGTGATTACAAGAAAATAGGTGCCAAGTTAAAGGATTTGGTTCCTTGTGTGCTTTTGTCTTTTGATGATCAACAAGTATTGATTTGGAGGGGCAAAAACTGGAAATCAATGTACCCAGAAGTTCCAGTTTTTACTCATGCTAAAGCTGGCATTACAAGGAATTTGGACAGTACAGGCATGGTTAATGACAATCAATCTAAGCATATGGGCAACATGGTCAACTCTAGCCCAAAAATGTTATCTCTATGGAAGAGTGCAATTGAGTCAAACAAAGCTTTGTTGCTAGAAGAATTTAATCTTGGACCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAAGGTATTTCACATGCCACAGAGCACTCCCATCCAGCATTTATTTCTTCAAGTGAAGATGCTTTTGAAGGTTCAGAAGACAACTATTCAAATGAAGAAGGCCTAGATAATGTTGATGATTATGACAGAAACAGTGATGACGAAGATGATTTTGATCACTACACCGATGACGAAGACAATGAGTTTAATGATATAGTGGTTACATCTGCTCAACCCGGATCGCTACCAATTGATTTGCTTGTTGGTAAGCTCAAACTAAGGCAAAAGGAGTAA 1311 0.4035 MPRPWTGKAPLKKSKKNIPLFDSFNPPPPGTKGVKHVEMPGPFPIGKFPEEGMSRKEILGEPLKKWEIQMLIKPMVSDNRQVNLGRDGLTHNMLELIQSHWKRCRVCKIRCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRSRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKSLLPICKLVKNGVYTTLVKDVRDAFEGSHLVKIDCKLLDPSDYKKIGAKLKDLVPCVLLSFDDQQVLIWRGKNWKSMYPEVPVFTHAKAGITRNLDSTGMVNDNQSKHMGNMVNSSPKMLSLWKSAIESNKALLLEEFNLGPDALLEKVEEFEGISHATEHSHPAFISSSEDAFEGSEDNYSNEEGLDNVDDYDRNSDDEDDFDHYTDDEDNEFNDIVVTSAQPGSLPIDLLVGKLKLRQKE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2650 436 MobiDBLite consensus disorder prediction 371 405 - -
Psa4g2650 436 ProSiteProfiles CRM domain profile. 179 275 IPR001890 GO:0003723
Psa4g2650 436 SUPERFAMILY YhbY-like 181 272 IPR035920 -
Psa4g2650 436 MobiDBLite consensus disorder prediction 366 405 - -
Psa4g2650 436 Pfam CRS1 / YhbY (CRM) domain 181 264 IPR001890 GO:0003723
Psa4g2650 436 Pfam CRS1 / YhbY (CRM) domain 67 146 IPR001890 GO:0003723
Psa4g2650 436 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 1 431 IPR044599 GO:0000373
Psa4g2650 436 ProSiteProfiles CRM domain profile. 61 157 IPR001890 GO:0003723
Psa4g2650 436 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 1 431 - -
Psa4g2650 436 SMART CRS1_YhbY_2 63 146 IPR001890 GO:0003723
Psa4g2650 436 SMART CRS1_YhbY_2 181 264 IPR001890 GO:0003723
Psa4g2650 436 Gene3D - 63 158 IPR035920 -
Psa4g2650 436 Gene3D - 181 280 IPR035920 -
Psa4g2650 436 SUPERFAMILY YhbY-like 62 155 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2650 Psa-Chr4 211203855 211207202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2650 - - gmx:100801953 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2650 4 211203855 211207202 Psa4g2650 4 211203855 211207202 ECH