Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2648 ATGCATCATCACACCCATCAATACCCTCTTCCTTGTTTGCATTGTCATCCACATAGCTATATTAGGATGGTTCAAAATTTGATAGAGAGATGCTTGATGTTTCAAATGAGTCAAGACCAATGCATTAAGACGTTAGAAGAACATGCAGGGATTGAGCCACTTGTTACTCTTACAGTGTGGAGAGAATTGCAAAAGGAGAATGAGGAGTTCTTTAGAGCATATTTGCAACAACTTATCCCTCCAAAATTCCATCAATGA 258 0.3837 MHHHTHQYPLPCLHCHPHSYIRMVQNLIERCLMFQMSQDQCIKTLEEHAGIEPLVTLTVWRELQKENEEFFRAYLQQLIPPKFHQ* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2648 85 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 21 76 IPR006476 -
Psa4g2648 85 Pfam Plant protein 1589 of unknown function (A_thal_3526) 24 74 IPR006476 -
Psa4g2648 85 PANTHER - 3 80 - -
Psa4g2648 85 PANTHER OS02G0137100 PROTEIN 3 80 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2648 Psa-Chr4 211056081 211057002 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2648 - - lja:Lj0g3v0326379.1 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2648 4 211056081 211057002 Psa4g2648 4 211056081 211057002 ECH