Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2582 ATGGTGATGATGAGATACACAACTCTAACAAATTCCGTCAAAACCCTATTCCGGTTTCAACTCCATTCTATCGCAACCCTACATTCCTCCGTTTCCCGTCAACCCACCGCTCATAGCTTCTACTATGGAAGCTTCAGGTACATCTCCTCTGCCCCAATCCACGTTGACCAAGAAGCTTCTACTGATAATCGCGTTCCAGCTACAATTCTAACTGGTTTTCTTGGCTCTGGAAAGACTACTCTTCTGAATCATATTCTCACATCCCAACACGGCAAGCGGATAGCTGTGATTGAAAATGAGTTTGGCGAGGTTGATATTGATGGATCACTGGTTGCTAGTCATTCTTCTGTGAGTGGTGAAAATATTATCATGGTCAATAATGGCTGCCTATGCTGCACTGTGCGAGGAGATCTAGTTAAAATGCTGTTGGAGTTGGTTAGGAAAAAAAGAGACAATTTTGATCACATTGTTATTGAAACCACAGGTCTTGCAAAACCAGCCCCTGTTATTGAAACTTTCTTCAGTGATGAACTAGTTTCTGAGTATGTTAAACTGGATGGAGTTGTGACTTTAGTTGACTGCAAGCATGCCATGCAACATTTGAACGAGGTGAAACCAAGATTTGTAGTCAATGAGGCAGTTGAACAAGTCGCATATGCTGACCGAATTGTTTTGAACAAGATAGATTTGGTTACTGAATCCGAGTTAAATATATTGACCAAGAAATTAAAGCACATTAATGGAATGGCACAAATTAAGCAAGCTAAATTTGGATCTGTTGACATAGACTTTGTTCTAGGTGTGGGAGGATATGATCTTCAGAGAATTGAATCTGAGGTAGATGGAGAATGCCCCTCTACAGCGAGCCACCCAGATGATTGTGGGAATGCACACAAAGGGCATCATCATCAGCATAATCATGATCACGTGCATGATTCTGCCGTCACTAGTGTCAGCATTGTTGCGGAGGGAACTCTTGATCGTGATGAGGTTGAAGATTGGCTTGAAAGATTGGTTGAAGAAAAGGGAGAGGACCTATACAGAATGAAAGGTGTCCTGTCAGTGGATGGTTCTGAACAACGATACGTGTTTCAGGGGGTGCATTCTATGTTGGATGACAGCCCAGGAAAAACATGGGAATCCAACGAAAAGAGGATAAACAAGCTTGTGTTCATTGGAAGGAATTTAGATGAAACTGCCCTCAGAAAAGGCTTCAAAGGCTGTCTAGTCTAG 1233 0.4225 MVMMRYTTLTNSVKTLFRFQLHSIATLHSSVSRQPTAHSFYYGSFRYISSAPIHVDQEASTDNRVPATILTGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVSGENIIMVNNGCLCCTVRGDLVKMLLELVRKKRDNFDHIVIETTGLAKPAPVIETFFSDELVSEYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIVLNKIDLVTESELNILTKKLKHINGMAQIKQAKFGSVDIDFVLGVGGYDLQRIESEVDGECPSTASHPDDCGNAHKGHHHQHNHDHVHDSAVTSVSIVAEGTLDRDEVEDWLERLVEEKGEDLYRMKGVLSVDGSEQRYVFQGVHSMLDDSPGKTWESNEKRINKLVFIGRNLDETALRKGFKGCLV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2582 410 Gene3D - 296 409 IPR036627 -
Psa4g2582 410 PANTHER COBW-RELATED 44 410 - -
Psa4g2582 410 Gene3D - 62 271 IPR027417 -
Psa4g2582 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 264 IPR027417 -
Psa4g2582 410 CDD CobW-like 66 269 - -
Psa4g2582 410 SMART CobW_C_3 315 409 IPR011629 -
Psa4g2582 410 PANTHER OSJNBA0083N12.6 PROTEIN 44 410 - -
Psa4g2582 410 Pfam Cobalamin synthesis protein cobW C-terminal domain 315 409 IPR011629 -
Psa4g2582 410 Pfam CobW/HypB/UreG, nucleotide-binding domain 66 252 IPR003495 -
Psa4g2582 410 SUPERFAMILY Hypothetical protein YjiA, C-terminal domain 315 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2582 Psa-Chr4 206448249 206453873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2582 - - gmx:100788010 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2582 4 206448249 206453873 Psa4g2582 4 206448249 206453873 ECH