LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g2520	ATGGGATCCCAAGGCGGGTTCGGTCAATCCAAGGAATTTCTCGACCTGATAAAATCAATCGGAGAAGCTCGATCTAAAGCAGAAGAAGATCGAATCGTAATCCGCGAAATCGAAACCCTTAAACGACGAATTTCTGAGCCTGATATCCCAAAACGGAAGATGAAAGAGTACATTATACGCCTTCTCTACGTTGAGATGCTTGGTCACGATGCTTCGTTCGGTTACATTCACGCCGTTAAAATGACTCATGATGATAACCTGCTTTCCAAACGCACCGGTTATCTTGCCGTTACTCTTTTCCTGAACGACGATCATGATCTTATCATTCTCATTGTTAACACTATCCAGAAGGACCTTAAGTCTGATAACTATCTTGTCGTTTGTGCTGCACTTAACGCCGTTTGTCGACTTATCAACGACGAGACTATCCCTGCCGTTTTGCCTCTCGTTGTTGAACTGCTTTCTCACTCTAAGGAAGCTGTTAGAAAGAAAGCGGTTATGGCACTTCATAGCTTCCACCGTAAATCTCCTTCCTCTGTTTCACATCTTGTATCGAATTTTCGGAAGCGATTGTGTGATAATGACCCTGGTGTTATGGGTGCTACTCTTTGTCCTCTGTTTGATCTCATAAACGACGATCCTACCCCGTTTAAGGATCTTGTTGTTAGCTTTGTTAGTATTCTTAAACAGGTAGCGGAACATCGGTTGCCTAAGAGCTATGATTATCATCAGATGCCAGCTCCGTTCGTCCAGATTAAGTTGCTGAAACTTCTTGCATTGTTGGGGAGCGGTGACAAGCCTGCTAGCGAACACATGTATACTGTTATCGGCGATATAATTAGGAAGGGAGATTCGTCAAGTAACATAGGGAATGCTATTCTTTATGAATCCATTCGCTGCATCTCTTCCATATATCCCAATCCCAAGTTGTTAGAAGCTGCTGCGGATGTGATTGCCAAGTTTTTAAAGAGTGATAGTCATAATCTGAAGTACATGGGCATTGATGCTCTCGGCCGGCTGATAAAGTTAAGTCCGCTTATTGCAGAACAACATCAACTTGCTGTCATTGACTGCTTAGAGGATCCCGATGATACTTTGAAGCGAAAAACTTTTGAACTGCTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACCGTATGATTGAGTACATGATCAGCATCAGTGACGATCATTACAAAACCTATATTGCTTCTCGATGTGTAGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGTGATCTTGTGAACATTAAGGTTGCACATAATTTAATGCGGTTGATTGCGGAAGGATTTGGAGAGGACGATGATGCGGCATACAGTCAGCTGAGATCTTCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGGGTTTCTTCAAGTTATCTGCTGGGTTCTTGGGGAATATGGCACAGCTGATGGCAAGCATTCCGCATCCTATATCACTGGGAAGTTATGTGATATGGCAGAGGCATATTCGAATGATGAAATCGTTAAGGCATACGCAATAACAGCATTGACAAAAATTTATGCATTTGAAATAGCAGCTGGGAGGAAAGTGGATATGCTATCTGAGTGTCAATCTTTGGTTGAGGAATTATTAGCATCCCACTCCACTGATTTGCAGCAACGTGCTTATGAGTTGCAAGCCGTTATTGGTTTGGATGCACGAGCTGTTGAAGCAATATTGCCGCATGATGCCAGTTGCGAAGATATTGAGGTCATTGTTAATTTCAACATATTTCTATGTCATCTTAAAATTAATAATGTTTTCACTATGTTGATTTATAATACTTAA	1884	0.4156	MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVIREIETLKRRISEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDNLLSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINDETIPAVLPLVVELLSHSKEAVRKKAVMALHSFHRKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLINDDPTPFKDLVVSFVSILKQVAEHRLPKSYDYHQMPAPFVQIKLLKLLALLGSGDKPASEHMYTVIGDIIRKGDSSSNIGNAILYESIRCISSIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPLIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAAYSQLRSSAVESYLRIIGEPKLPSGFLQVICWVLGEYGTADGKHSASYITGKLCDMAEAYSNDEIVKAYAITALTKIYAFEIAAGRKVDMLSECQSLVEELLASHSTDLQQRAYELQAVIGLDARAVEAILPHDASCEDIEVIVNFNIFLCHLKINNVFTMLIYNT*	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g2520	627	SUPERFAMILY	ARM repeat	10	581	IPR016024	-
	Psa4g2520	627	PIRSF	AP4_epsilon	1	611	IPR017109	GO:0015031\|GO:0030124
	Psa4g2520	627	PANTHER	AP-4 COMPLEX SUBUNIT EPSILON-1	4	606	-	-
	Psa4g2520	627	Pfam	Adaptin N terminal region	41	581	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Psa4g2520	627	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	4	606	-	-
	Psa4g2520	627	Gene3D	-	3	594	IPR011989	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g2520	K12400		-	gmx:100806914	1086.63

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa4g2520	4	202652213	202659099	Psa4g2520	4	202652213	202659099	ECH