Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2376 ATGCCAAAGCGTAACTGCGTCATTGTTCTCTCATCTGATGAGGAACAACATACTCCCAAAACTCGTTCATCTACTTCGACCCGTACAAATCCCAAGCCCAAGCCCAAGCCCAACTCGAGTTCAACGGGCTCCATAGGAAGAAAGAAAGCCCGTGTTTCCAGCTCTGCGCCTCGTCTATCTAAGCTTCATGAGATAAACTTGTTTGATGATGATTTCAATGAAGTGTTTACTAGGTCAAAGGTATTCGCTGGTACTCAACAGAACACTGCAGAGGAGCTATGGGTTGATAAATACAAGCCTCATTCACTGGAAGAGCTTTCTGTTCACAAGAAAAAGGTTGAAGAAGTTAAGACATGGTTTGAAGAAAGGATGAAACCTTCAAAGGGTGTCTACAGAAATAACGTTCTTGTTGTCAGTGGGCAGGCAGGAGTTGGAAAATCTGCTGCTATTAATGTAATTGCTTCTCATTTGGGTGCGATGGTATGTGGATGGAACACACCTACACCTGTAATTTGGCAAGAGCATCTTTATAACTCTGGAACAGCGACAAAATACACTTCCAAGTTGGATGAATTTGTTAGTTTTGTTGAGAGAATACGGAAATATGGATTAATACCAAATTCCTTTACCGGGGAGTCAAAGCCTTCCATCATATTTTTAATAGACGATCTTCCCATGATGCATAGTAAAGCTGCTTTAGGAAGACTTAAAGATTGCTTGCACCTTTTGGTGCACACAACTCAAATACCCACAGCCATATTGGTGACAGATTATGGCAATGCTGATTCAGCTGATTATAATGCACGATCCGTTGAAGAACTTAAAACATCTCTAGAACGTTCTGGGGCTTGTAAGGTTGCATTCAATCCAATTACAGTCAATTCTATTAAGAAGGTACTTTCTAGAATATGTCAAATTGAGCAGTGTGATGTGACTGCTGACCATGTTGATCTAATAGCAAAAGCAAGTGGAGGTGACATCAGACATGCAATTACTTCTCTACAGTTTTTCTGTGTGAACCCATATCAAGTGCATTCTTTGTCTCTATCAACTCGCACTCCTCATGCATTAAAAGAGGAAAGAAATAAACCCATTGAATTAGATGATGGATCTTCCTTGTACTTTGGCAGAGATGAGACACTGTCTTTATTTCACGCCTTAGGGAAGTTTTTGCATAATAAGAGGGAGACTGAAGTTGCAGCAGAATATGACCAAAACAGCTTTCTCATACAAGAAAGATTTTCAAGATTACCTTTAAAAATGGATGTCCCAGAGAAGATTCTTTGTCAAAGCCATGTGCAACCTGGTCCAGTTGCTGATTTTCTGCACGAAAATGTTTTAGATTTTTTGAATGATGAGGCAGTAGAGGATGCATGGATTTTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCTAAGCTTCGGGGTATGCTATCTAGTTATAATGAGGCAGAGAGTATTTTACAGTCAGCTGCTGCGTCAATTGCTGTTCGTGGGGTGCTGTTTGGAAATTCTCAGCCAATTTCTTCCAGGTGGCATGCAATTCGACGACCAAAACTCTGGCAGGTTCAGAAAGAATCATCATACCACAAGAGTGAGATGTTTAGACAGAGAATCCCTGCTTGTAATCAGCTGAGTTCTTATCATATGTCAGTTATGGCCACAGAATACATACCTATGTTTAAATTGCTTGGAGATAGGGTTGGCAGTGGATATAATGAACTAGATCAGGAATCAGTGCAGAACATGGATATGGAAGATTTCGATACTGACAAAATGAGTTTAGATGGTGAAGCAATGGAGATTTCCGATGATGACATAGAAGACTGGTAG 1836 0.4041 MPKRNCVIVLSSDEEQHTPKTRSSTSTRTNPKPKPKPNSSSTGSIGRKKARVSSSAPRLSKLHEINLFDDDFNEVFTRSKVFAGTQQNTAEELWVDKYKPHSLEELSVHKKKVEEVKTWFEERMKPSKGVYRNNVLVVSGQAGVGKSAAINVIASHLGAMVCGWNTPTPVIWQEHLYNSGTATKYTSKLDEFVSFVERIRKYGLIPNSFTGESKPSIIFLIDDLPMMHSKAALGRLKDCLHLLVHTTQIPTAILVTDYGNADSADYNARSVEELKTSLERSGACKVAFNPITVNSIKKVLSRICQIEQCDVTADHVDLIAKASGGDIRHAITSLQFFCVNPYQVHSLSLSTRTPHALKEERNKPIELDDGSSLYFGRDETLSLFHALGKFLHNKRETEVAAEYDQNSFLIQERFSRLPLKMDVPEKILCQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDADILLAKLRGMLSSYNEAESILQSAAASIAVRGVLFGNSQPISSRWHAIRRPKLWQVQKESSYHKSEMFRQRIPACNQLSSYHMSVMATEYIPMFKLLGDRVGSGYNELDQESVQNMDMEDFDTDKMSLDGEAMEISDDDIEDW* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2376 611 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 43 610 IPR004582 GO:0006281
Psa4g2376 611 MobiDBLite consensus disorder prediction 1 57 - -
Psa4g2376 611 CDD HLD_clamp_RFC 291 344 - -
Psa4g2376 611 MobiDBLite consensus disorder prediction 22 49 - -
Psa4g2376 611 Gene3D - 294 348 - -
Psa4g2376 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 339 IPR027417 -
Psa4g2376 611 Gene3D - 91 270 IPR027417 -
Psa4g2376 611 Pfam Rad17 P-loop domain 89 265 - -
Psa4g2376 611 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 43 610 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2376 K06662 - gmx:100799826 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2376 4 191600238 191606996 Psa4g2376 4 191600238 191606996 ECH