Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2337 ATGGGAGAGAGGATGATGAAGATAGTAACTTACAACGTAAACGGTTTGAGACAACGCATATTGCAGTTCGGTTCTCTCCGCAATCTGCTCAATTCATTCGACGCTGATATTATTTGCTTTCAGGAGACAAAACTTAGCAGACAAGATGTTACAGCGGATTTGGTTATGGTAGATGGATACGAATCGTTCTTTTCTTCTACCCGAACTTCTCAGAAAGGCCGAACCGGTTATTCCGGTGTTATTACATTTTGTCGAGTAAAGTCTGCTTTTTCGAGTACTGAAGCAGCATTGCCCTTGGCAGCTGAAGAAGGATTCACTGGCCTAATGTGTAACTCTCAAACTACTGAAGATAAATTGCCACTCTTCATAGAAGATCTTGAGGGTTTTTCAAAAGATGAGCTTTTCAGTGTTGACAGTGAAGGGCGATGCATTGTCACTGATCATGGTCACTTTGTTCTTTTCAATATTTATGGGCCTCGAGCTGGAAGTGATGACACGGAGAGGATTCAGTTTAAACAAATATTCTACAGGATACTGCAGAAAAGATTGGAGTCTCTCCTGCATCAAGGAAGGAGAATCTTTGTTGTTGGTGATCTCAATATTGCACCGTTTGCAATTGATAGGTGTGATGCAGGGCCTGATTTTGACAATAATGAGTTTAGAAGATGGTTCAGATCGATGCTAATTGAAAATGGAGGCCACTTTTCTGATGTCTTCCGAGCAAAATATCCTGATAAAAGTGATGCATTCACCTGTTGGTCTCAAAGTACGGGTGCTGAAGTATTTAACTATGGGAGTAGAATCGACCATATTCTATGTGCTGGTTCATGCTTACATAAATTAGATGACCTGCAATGTCATAGTTTTATAAGATGCCATGTTAAAGAATGTGAAATTATGACACAGTACAAACGGTTCAAACCAGAAAGCACACCGAGTGCCCACATGCGGAAGGGAGGAAAGAGTGTTAAACTAGAAGGATCCGATCATGCTCCAGTTATTTTGACTTTGATGGAAATTCCTGAGGTCTCTCTGCATAGTACCCCCTCCTTATCTGCTAGATATGTTCCCATGATTCATGGTGTCCAGCAAACTCTAGTGTCATTGTTGATGAAAAGACGAGTTTCTGATTCGTGCAAGATGGCAGACAGTGACATTTCAGTGGTCAGTACTTCTGAGAGAATAGAAGAACCAAATGACATGATTGGTTCATCTACCCGTGAATGTGATTTTCTTCCAAACAAAGATTCAGAACGTAGCATTTTGGAACCAAATAAACTTTCCACAGGTTCTTCTCTGGAGACTGTTTCTAAATCAGGAAGTTTATTTAAAAAATCAAAAATTCAGAAATGCAATGAATCCAAAAAAAAGGCTCGAAATAGTCAATCGTCCCAGCTCTCACTTAGGTCATTTTTTCAGAAAAGTACAAATCTTGACAATGGTATCAAGGACTCTTGTATTGGTTTCTCAGATAGTCAGGCAGAACCCTCACAACCCAACTCTCAATCACTTGAAAATTCTACAGTGTTTGATCATAGTAGCAGTCCTGTGCAAGATGAGGCGAGTGCAGCATGCGATCAGGATTTAGCTGAACTAAATGATAGTTCTAGAAAAGAAGAGAAGAGTAATGTAGCTTCACAAGAGTGGCAAAGAATACAAAAAATGATGCAAAACAGTATACCTCTTTGCAAGGGACATAAGGAACCTTGTATTGCTCGGGTGGTAAAGAAACAAGGAGCTAATTTTGGTCGCAGATTCTATGTTTGTGCCCGTGCTGAGGGCCCTGCATCTAATCCTGAAGCAAACTGCGGCTACTTTAAATGGGCTACTTCAAAGTCTAAGAATAAATAA 1851 0.4019 MGERMMKIVTYNVNGLRQRILQFGSLRNLLNSFDADIICFQETKLSRQDVTADLVMVDGYESFFSSTRTSQKGRTGYSGVITFCRVKSAFSSTEAALPLAAEEGFTGLMCNSQTTEDKLPLFIEDLEGFSKDELFSVDSEGRCIVTDHGHFVLFNIYGPRAGSDDTERIQFKQIFYRILQKRLESLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFDNNEFRRWFRSMLIENGGHFSDVFRAKYPDKSDAFTCWSQSTGAEVFNYGSRIDHILCAGSCLHKLDDLQCHSFIRCHVKECEIMTQYKRFKPESTPSAHMRKGGKSVKLEGSDHAPVILTLMEIPEVSLHSTPSLSARYVPMIHGVQQTLVSLLMKRRVSDSCKMADSDISVVSTSERIEEPNDMIGSSTRECDFLPNKDSERSILEPNKLSTGSSLETVSKSGSLFKKSKIQKCNESKKKARNSQSSQLSLRSFFQKSTNLDNGIKDSCIGFSDSQAEPSQPNSQSLENSTVFDHSSSPVQDEASAACDQDLAELNDSSRKEEKSNVASQEWQRIQKMMQNSIPLCKGHKEPCIARVVKKQGANFGRRFYVCARAEGPASNPEANCGYFKWATSKSKNK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2337 616 MobiDBLite consensus disorder prediction 491 521 - -
Psa4g2337 616 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2 6 606 - -
Psa4g2337 616 PANTHER AP ENDONUCLEASE 6 606 IPR004808 GO:0004518|GO:0006281
Psa4g2337 616 MobiDBLite consensus disorder prediction 415 434 - -
Psa4g2337 616 SUPERFAMILY DNase I-like 6 337 IPR036691 -
Psa4g2337 616 Pfam Endonuclease/Exonuclease/phosphatase family 9 274 IPR005135 GO:0003824
Psa4g2337 616 Pfam GRF zinc finger 561 610 IPR010666 GO:0008270
Psa4g2337 616 ProSiteProfiles AP endonucleases family 1 profile. 6 339 IPR004808 GO:0004518|GO:0006281
Psa4g2337 616 MobiDBLite consensus disorder prediction 491 523 - -
Psa4g2337 616 Gene3D Endonuclease/exonuclease/phosphatase 1 339 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2337 Psa-Chr4 189014980 189019361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2337 K10772 - gmx:100781120 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2337 4 189014980 189019361 Psa4g2337 4 189014980 189019361 ECH