Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2325 ATGGCACCCGCGAGAACTCTCAGCCATCTTTCCCAAGAAAAAACCCTCCAGTCCAGTTTCGTTCGTGACGAAAGCGAGCGTCCAAAAGTCTCTTACAATGACTTCAGCAATGACATTCCAATCATTTCTCTCGCCGGAATCGACGATGTCCATGGCAGAAGAACAGAAATTTGCGACAAAATTGTAGAAGCTTGCGAGAATTGGGGTATCTTCCAAGTTGTTGATCATGGTGTTGATTCAAATCTCATTTCCGAGATGACCCGTTTTGCCAAAATGTTCTTCGATTTGTCACCGGAAGAGAAGCTTCAGTTTGACATGTCCGGTGGTAAAAGAGGTGGCTTCAATGTCTCTAGTCATCTCCAAGGAGAAGCAGTGAAGGATTGGAGAGAGATAATGATATATTTTTCCTACCCAATTAGTCAAAGAGACTATTCAAGGTGGCCAAACAAGCCAGAAGGATGGAAAGCAGTTACAGAGCAATACAGTGAGAAGCTAATGAGTTTAGCTTGTAAGCTATTGGAAGTTTTATCAGAGGCTATGGGGTTAGAGAAAGAAGCTCTAACAAAAGCATGTGTTGATATGGATCAAAAGGTTGTGGTGAATTACTACCCAAAATGTCCTGAACCTGATCTCACTCTTGGGCTGAAACGACACACTGACCCTGGCACCATCACTCTGTTGCTTCAAGATCAAGTTGGTGGTCTTCAAGCAACTAGAGATGATGGTAACACGTGGATCACTGTTAAGCCAATTGAAGGTGCTTTTGTTGTCAATATTGGAGATCATGGTCATTATCTGAGTAATGGACGGTTCAAAAACGCTGATCATCAAGCAGTGGTGAACTCAAACTACAGTCGTCTATCCATTGCGACATTCCAGAATCCAGCACCAGATGCAACTGTGTACCCTTTGAAGATTCGAGAAGGAGAGGAATCTGTGTTGGAGGAACCAATTACTTTTGCTGAAATGTACAGGAGGAAGATGAGCAAGGACCTTGAGATTGCTAGGATGAAGAAGATGGGTAAGGAAGTAAAAGAAAATAGGGAACTTGAAGCCAAATCTCTGAATGAGATCCTTGCTTAG 1083 0.4294 MAPARTLSHLSQEKTLQSSFVRDESERPKVSYNDFSNDIPIISLAGIDDVHGRRTEICDKIVEACENWGIFQVVDHGVDSNLISEMTRFAKMFFDLSPEEKLQFDMSGGKRGGFNVSSHLQGEAVKDWREIMIYFSYPISQRDYSRWPNKPEGWKAVTEQYSEKLMSLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVKPIEGAFVVNIGDHGHYLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPDATVYPLKIREGEESVLEEPITFAEMYRRKMSKDLEIARMKKMGKEVKENRELEAKSLNEILA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2325 360 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 351 - -
Psa4g2325 360 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 6 351 - -
Psa4g2325 360 SUPERFAMILY Clavaminate synthase-like 11 330 - -
Psa4g2325 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 295 IPR005123 -
Psa4g2325 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 148 IPR026992 -
Psa4g2325 360 Pfam 2OG-Fe(II) oxygenase superfamily 196 294 IPR044861 -
Psa4g2325 360 Gene3D - 5 334 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2325 Psa-Chr4 188016462 188018248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2325 38 312 Glycosyltransferase AT5G59530 33.688 5.41e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2325 K00475 - qsu:112035407 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2325 4 188016462 188018248 Psa4g2325 4 188016462 188018248 ECH