Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2304 ATGGAACTAAAGGTTGGTGATGATGGAAACAGACAACACTATGGAAGTGCCTTGTGTTGGTGGTTAACAGTTTCTGTGGTAGCTATCCTCGTAGTTGGTGCTGGTGTTTTTACTATACTTGCCAAGTTTCATCATCATTCTCATTCACCTCAACTCTCCAACATCAATACCAAATATGTCTCTTCTCTTCAATTAGCCCTTCGGTTTTTCGATGTCCAAAAGTCTGGTAAGGTGGAGAATAATAGGGTTTCGTGGAGAGGGGATTCAGGGCTAAGAGATGGGAGAGAAGAGAGTTTGGATTTGTCTAAAGGATTGTATGATGCTGGTGATCTTGTGAAGTTTGGGTTTCCAATGGCTTTCACTGCTACTGTTTTGTCTTGGGCTATTCTTGAATATGGACATCATATGGATGCAGTGAAGCAGCTAGATTATGCAATGGAATCTCTCAAGTGGATCACTGATTATCTTGTTAATGCTCATCCTTTCGCTGATATCCTTTACATTCAGGTAGGGGATCCTGAGGTGGACCACAATTGCTGGGAAAGGCCTGAAAACATGACTGAGAAAAGGCCAGTCATTCAAGTTAACTCATCTTTCCCAGGAACAGAAGTTGCGGCAGAAACAGCAGCTGCACTAGCCTCGGCGTCTCTAGTTTTTAAGGAAATTAATCTCACTTACTCTCAGATTCTCCTTGAACATGCTCAACAACTGTTTACTTTTGCTGATACATACAAAGTTTCCTACAGTGTCAGTGTTCCTCAAGTTGGGAAATACTATAACTCATCAGGTTATGAGGATGAACTTTTATGGGCAGGTAGCTGGCTTTATCATGCAACAAAGGATCCATCATACTTAAATTACGTGACAGAGAAGAACGAGAATGAATTTGGAAGTTTAGGAAGTGTATCTTGGTTTAGTTGGGATGATAAGCATGCTGCAACTCAGGTTCTTCTGTCTAGAGTAAACTTTTTCGGAGCTAGAGATATCCCAGATGTAGAGAACCTTGACCTTCAAAAGTATAGAGAAACCACTGAAATACTCATGTGCAAGCTTCTACCAGATTCACCAACAGCTACAACCAACAGAACCAAAAGTGGATTGATTTGGGTGGTACCATGGAACTCTCTGCAACATTCAGTGGCGTCTGCATTCTTATCTGTTCTTTATAGCGATTACATGTTGACATCTCAAACTGAAAATCTATATTGTAGCGGGAAAATGTATAAGCCAATAGACCTCCGAAAATTCGCAATTTCTCAGGTAGAGTATGTGTTGGGAGAAAATCCGATGAGGATGAGTTATCTTGTAGGATATGGAAGTGAGTATCCTAGATATATACATCATAGAGGATCTTCAATTCCAGTTGATGCTAAAACTGGTTGCAGGGATGGATTCAAGTGGTATGATTCACCTGAGCCTAATCCTAATGTGGCATTTGGAGCTTTGGTAGGGGGTCCCTTTTTCAATGAGACATATGATGATTTTAGGAACAACTCAATGCAGGGTGAGCCAACTACTTATAGTAATGCACTTTTGGTTGGTCTTTTATCTGGCTTGGTTGCCACTTCCTCTGTAGCTTGGTCTTTCTAA 1590 0.4094 MELKVGDDGNRQHYGSALCWWLTVSVVAILVVGAGVFTILAKFHHHSHSPQLSNINTKYVSSLQLALRFFDVQKSGKVENNRVSWRGDSGLRDGREESLDLSKGLYDAGDLVKFGFPMAFTATVLSWAILEYGHHMDAVKQLDYAMESLKWITDYLVNAHPFADILYIQVGDPEVDHNCWERPENMTEKRPVIQVNSSFPGTEVAAETAAALASASLVFKEINLTYSQILLEHAQQLFTFADTYKVSYSVSVPQVGKYYNSSGYEDELLWAGSWLYHATKDPSYLNYVTEKNENEFGSLGSVSWFSWDDKHAATQVLLSRVNFFGARDIPDVENLDLQKYRETTEILMCKLLPDSPTATTNRTKSGLIWVVPWNSLQHSVASAFLSVLYSDYMLTSQTENLYCSGKMYKPIDLRKFAISQVEYVLGENPMRMSYLVGYGSEYPRYIHHRGSSIPVDAKTGCRDGFKWYDSPEPNPNVAFGALVGGPFFNETYDDFRNNSMQGEPTTYSNALLVGLLSGLVATSSVAWSF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2304 529 SUPERFAMILY Six-hairpin glycosidases 58 522 IPR008928 GO:0005975
Psa4g2304 529 PANTHER ENDO-1,4-BETA-GLUCANASE 16 529 - -
Psa4g2304 529 PANTHER ENDOGLUCANASE 2 16 529 - -
Psa4g2304 529 Pfam Glycosyl hydrolase family 9 59 516 IPR001701 GO:0004553|GO:0005975
Psa4g2304 529 Gene3D - 55 524 IPR012341 GO:0005975
Psa4g2304 529 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 423 449 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2304 Psa-Chr4 187425070 187427523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2304 19 525 Glycoside Hydrolase AT1G75680 60.506 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2304 - K01179 gmx:100782202 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2304 4 187425070 187427523 Psa4g2304 4 187425070 187427523 ECH