Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2270 ATGTTGAAACATGGATTACCGGCTTCATCTTCATCGTTGTTGTTCCTCCCGTTCCTCTTTTTCTCCTACGCCATAGCTTTCATTCCACCTCATATCCTGCTCAATCACTTGTCTCAAGGCAAATCCCTCACCAATCAGGAACTATGGTTCAATCAGACTCTCGATCACTTCTCTCCCTATGATCATCGTCAATTCAGGCAACGTTACTATGAATTTCTAGATTATTTCCGGATTCCGGATGGACCCATTTTTCTGGTGATAGGTGGTGAAGGAACATGCAGGGGGATATCAAATAACTATATTGCTGTACTGGCAAAGAAGTTTGGAGCAGCCGTGGTTTCTCTTGAACATCGCTATTATGGAGCAAGCACCCCATTTGATACTTTATCAACGGAAAATTTGAAATATCTTTCATCCAAACAGGCACTCTTTGATTTGGCTGTTTTTCGGCAGTATTATCAGGACTCTTTAAATGCAAAGCTGAATCGAACAGGAGTTGAAAATCCATGGTTCTTTTTCGGTGGCTCATATGCTGGAGCACTTAGTGCATGGTTCCGTCTTAAATTTCCCCATTTAACATGCGGTAGTCTTGCAAGTTCTGCAGTTGTTCAGGCTATTCAAGACTTCACTGAGTTTGATCAACAGATCGGTGAGTCAGCTGGTGCTGAGTGTAAAGCAGCATTACAAGAAACTACTCAACTCATCGAAACAAAACTCGCAACCGATGGAAAGGCACTGAGGACAACTTTTAATGCAGATGATCTTGAAGTTGATGGAGACTTCTTGTATTATATGGCTGATGCTGCTGTTATAGCGTTTCAATATGGAAATCCAGATAAGTTATGCAACCCTTTGGTTGATGCAAAGAAGGCTGGCGAGGATTTGGTGGATGCTTATGCCAAATATGTCAAAGAGTACTATGCTGGAACTTTTGGCGTCAATGTACAAATTTATGACCAGAAATATTTGAAAAGAACTGCAATCAATAAAGACAGTTCTTCTCGATTATGGTGGTTTCAAGTTTGCACTGAAGTTGCATACTTTCAGGTAGCTCCTTCAAATGATAGCATACGTTCCTCAAAAGTTGACACAAAATACCATTTGGACCTTTGCAAAAATGTCTTTGGAGATGGCGTCTTTCCCGATGTTGATGCCACTAATTCATACTATGGAGGCACAAAAATTGCTGGTTCAAAAATAATATTTACAAATGGCTCACAGGATCCATGGCGTCATGCTTCCAAGCAAACTTCATCCGCTGATATGCCTTCTTACCTTATCACGTGTAAAAACTGTGGCCATTGTACTGATTTGAGTGGGTGTCCTCAAGCTCCTTCTAACATTGAAGGTAATGAGAAGAATTGCAGTTCCCCTGATGCAGTTCATAAAGTAAGGCAAAAGGTTCAAGAAGATATGGACTTATGGCTATCTGAATGCATCGATACAGGAAGGAGTTTTATATGA 1464 0.4078 MLKHGLPASSSSLLFLPFLFFSYAIAFIPPHILLNHLSQGKSLTNQELWFNQTLDHFSPYDHRQFRQRYYEFLDYFRIPDGPIFLVIGGEGTCRGISNNYIAVLAKKFGAAVVSLEHRYYGASTPFDTLSTENLKYLSSKQALFDLAVFRQYYQDSLNAKLNRTGVENPWFFFGGSYAGALSAWFRLKFPHLTCGSLASSAVVQAIQDFTEFDQQIGESAGAECKAALQETTQLIETKLATDGKALRTTFNADDLEVDGDFLYYMADAAVIAFQYGNPDKLCNPLVDAKKAGEDLVDAYAKYVKEYYAGTFGVNVQIYDQKYLKRTAINKDSSSRLWWFQVCTEVAYFQVAPSNDSIRSSKVDTKYHLDLCKNVFGDGVFPDVDATNSYYGGTKIAGSKIIFTNGSQDPWRHASKQTSSADMPSYLITCKNCGHCTDLSGCPQAPSNIEGNEKNCSSPDAVHKVRQKVQEDMDLWLSECIDTGRSFI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2270 487 Pfam Serine carboxypeptidase S28 52 441 IPR008758 GO:0006508|GO:0008236
Psa4g2270 487 Gene3D Serine carboxypeptidase S28, SKS domain 208 361 IPR042269 -
Psa4g2270 487 PANTHER SERINE PROTEASE EDA2-RELATED 18 481 - -
Psa4g2270 487 Gene3D alpha/beta hydrolase 49 440 IPR029058 -
Psa4g2270 487 SUPERFAMILY alpha/beta-Hydrolases 79 479 IPR029058 -
Psa4g2270 487 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 18 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2270 Psa-Chr4 184823213 184828629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2270 - - aprc:113857786 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2270 4 184823213 184828629 Psa4g2270 4 184823213 184828629 ECH