Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2262 ATGGATTCGGTTCCGCCTCCCCCTCCTTGGAATTCAGATGACGATTTTCTCCTCAAGAACGCCATTGAGACTGGAGCTTCGCTGGAATCGCTGGCAAAAGGAGTTGTTTCCTTCTCCCGGTGGTATTCACTTAGGGAGTTGAGGGAACGCTGGCGTTCTGTTCTCTATGATTCCGATGTTTCTGATGAAGCTTCTGCTGCCATGAAGAATTTGGAGCTCGCCAAGTCTAACGGTAATGGAACCAAGGAAGTTGCTGCCCCGAAGAGGAAGACTCAGACCATTCGCAAGGTATATAACGACATGCGGAAGAGACTTCGCACGGAGGTTTTTTTTAATTCTTTTGATATGGCTTTATGTGATGAGATGTGTATTGAAAATAACACCAATGGAAATGAAATTGGTGGGTATGGTAATGTTAATGCTAGTTTAAATAAGGATGTGAATTATAATTTGCTTGTAAATAGTTTAGTTAAGGATGGGAGTCAATTGGGGTTAGTGGGAGCTAGGGCAGGGTCATCTCATTCAATGAGTGAAGATCCAATTCGGAAGACAATTGAGGATGTCCCTGCACCTAACAGGCCGGTTCGTGTTAGTCTTGAAAATGAAAATGGAGTTTCTGAGACGAAAGAGATGATTCCCCATGTTTCTGATGCTCTCTTGAACTCCCCGAATGGAGACGGGCTTATGTCAATGAGTATAGGTGAGACTGCAGCGGATAAGCAGTCTGATGTTAATGTTGATTCAAATCTTTTGCCTTCTCCTTGTGACATTCAAGGTGTTGGTGAGTCTCAGAAGTTGGCTGAAAAAACACAACTTGCTATGGCAAATGGTCCGTCTGCTGTGTTAGAGGTTGTTGCTAACTCGTCAGGTAGCAGTCACGGTGATGTGGGTTTTGCTTCTGATTGTGAAAATGAAGTCCAACCGTCTGGTGCGGTGCAAAAATCTGACCCTAAACCTGCAAATGAATTTAGGTTATGTTCATTGAACACCGAGGACCCTAATATCCCGTCAGATGACACTAACTGTGCAAAAGTATCTGATGTAGTTCCTAATTCTGAAAACGTATCTGCTATACTAATTCCGACTGTAAACATATCCACAGTAGTAGTTCCTAATTCTATGATTCCGAAACCCATATCGATTGTTAAAGAAGTGGGGTATCCGGATTCCTCTATTAGTAATCTAACAAAAAGGGAACCAAATGAAGGCTTGAAGAGAAAAGACACCCCTTCAAGCTCTTTTGCAGCTTCTCAGTCATTTCGACCAGGATTAGTTCCTAATATAAGGTCAAGCAAGGAAAATTCAGTTGCTGCTGTACTAAATATTGAAAATCCTGCAAAGAACTCAATTTCCAAAGTTTCTAGACAGAGTAACAATGCCACTGTCAACATCAACCCAAGTCAAAGCAGATTAGTTCATGCAACTATGAAGCATGCCTCATCTGGACATCCGGCACCAGAGGTAGTTATTGCTCTGCCTTCACCTGTTAATACACATCCAACGGAAGAGGAGGATAAGTCTTTACCTGAGATAGAAGAAAAATTGATATGCATTGATCAGGAAAAAGGCGATGCTCATGGTGATTATGATAGTGATAGCGATGAGGAGCACGAAGTTCCTTACTATTCTGATGCTGAGGGAATGATTCTTGAAATGGATTTAGTTCCAACTGTTCAAGATACAAATGCAAGCACCGAAGTGATAAGATATCAGAGTGATGAAACTAAGAAGACCATCATGAGATTGGAGCAATGTGCCCAGTCTTTTGTGCAAAGAGCCATTGCATCTCGAGGTGCACTTGCAGTGTTTTATGGGCGCACTCTGAAGAAATATATCGAAAAATCCGAGGTGATAATTGGCAGATCAACAGCTGATGCAGATGTTGATATTGACTTGGCTAGAGCAGCGAAAGATGCTCACAAGATATCTAGAAGACAAGCTTCAATAAGGATGGATGCGAATGGTTCTTTCATCATCAAAAACCTTGGCAAGAGGACTTTATACTTGAATGGCAAAGAAGTTCCTAAAGGACAGATGCGGAGTCTGAGTGCTGGTAGTTTGATCGAGATTTGGGGCTTGGCATTCATCTTTGATGTCAATAAGAAATGTGTCGAGAGGTTTATAGGAAATGTGAATGAACAGAATCGGATAAAAGAATGA 2160 0.419 MDSVPPPPPWNSDDDFLLKNAIETGASLESLAKGVVSFSRWYSLRELRERWRSVLYDSDVSDEASAAMKNLELAKSNGNGTKEVAAPKRKTQTIRKVYNDMRKRLRTEVFFNSFDMALCDEMCIENNTNGNEIGGYGNVNASLNKDVNYNLLVNSLVKDGSQLGLVGARAGSSHSMSEDPIRKTIEDVPAPNRPVRVSLENENGVSETKEMIPHVSDALLNSPNGDGLMSMSIGETAADKQSDVNVDSNLLPSPCDIQGVGESQKLAEKTQLAMANGPSAVLEVVANSSGSSHGDVGFASDCENEVQPSGAVQKSDPKPANEFRLCSLNTEDPNIPSDDTNCAKVSDVVPNSENVSAILIPTVNISTVVVPNSMIPKPISIVKEVGYPDSSISNLTKREPNEGLKRKDTPSSSFAASQSFRPGLVPNIRSSKENSVAAVLNIENPAKNSISKVSRQSNNATVNINPSQSRLVHATMKHASSGHPAPEVVIALPSPVNTHPTEEEDKSLPEIEEKLICIDQEKGDAHGDYDSDSDEEHEVPYYSDAEGMILEMDLVPTVQDTNASTEVIRYQSDETKKTIMRLEQCAQSFVQRAIASRGALAVFYGRTLKKYIEKSEVIIGRSTADADVDIDLARAAKDAHKISRRQASIRMDANGSFIIKNLGKRTLYLNGKEVPKGQMRSLSAGSLIEIWGLAFIFDVNKKCVERFIGNVNEQNRIKE* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2262 719 MobiDBLite consensus disorder prediction 392 418 - -
Psa4g2262 719 Gene3D - 556 708 - -
Psa4g2262 719 PANTHER MICROSPHERULE PROTEIN 1 171 718 IPR037912 GO:0002151|GO:0031011|GO:0071339
Psa4g2262 719 PANTHER MICROSPHERULE PROTEIN 1 1 140 IPR037912 GO:0002151|GO:0031011|GO:0071339
Psa4g2262 719 SMART FHA_2 616 674 IPR000253 GO:0005515
Psa4g2262 719 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Psa4g2262 719 SUPERFAMILY SMAD/FHA domain 608 700 IPR008984 GO:0005515
Psa4g2262 719 PANTHER FHA DOMAIN PROTEIN 1 140 - -
Psa4g2262 719 PANTHER FHA DOMAIN PROTEIN 171 718 - -
Psa4g2262 719 CDD FHA 613 690 IPR000253 GO:0005515
Psa4g2262 719 Pfam FHA domain 617 690 IPR000253 GO:0005515
Psa4g2262 719 ProSiteProfiles Forkhead-associated (FHA) domain profile. 617 674 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2262 Psa-Chr4 184178342 184183209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2262 - - mtr:MTR_8g076470 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2262 4 184178342 184183209 Psa4g2262 4 184178342 184183209 ECH