Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2255 ATGTCCGCGGTTCCCAAATCAGAGAAAAACACCGTCAACGTCGACAGCGACGACGACGCCTCCGCGAGTGCTGTAATGAGCGACGTTCATTTACCACTTCAGCTTCAGGAGCAGCAAAACCCTCCTCAATCGACCTCAACTCCGTTAGTCTCTGAAAGCCATAGTTTCTGGAAAGCCGGTGATTATGTTGTTGGCCCTACTTCTAAGCCTTCTCCCAGTCAAGGTCACTTGGATCATGCACGAGTTCATCCCAAGTTTCTTCATTCTAACGCCACTTCTCATAAATGGGCTTTTGGAGCAATTGCTGAGCTAGTGGATAATGCTGTTGATGAGATCCAAAATGGTGCGACTTTTGTTAAGGTTGACAAGCTTAAGAACAAGAAGGATAATTCACCAGTGCTAGGCTTTCTAGATGATGGCGGTGGAATGGATCCCAACTCACTACGGAAGTGCATGAGCTTGGGTTATTCTTCAAAGAAGTCGAAGACAACAATTGGGCAGTATGGAAATGGATTCAAGACTAGTACTATGAGACTGGGTGCTGATGCTATTGTTTTTAGCCGCGCTACACATTTGGGCCGGGCAACACAAAGTGTAGGTCTTCTATCCTATACCTTTTTGAGGAAAACTGGGAAAGATGATGTAATCATTCCGATGATAGATTTTGACATATCTGGCCATTGGCCTGAGCCAATTGTTTATGGCTCACTGGACGATTGGTCATCAAACTTGAAAACAATTCTTGATTGGTCTCCTTTCACATCCAAGGACGAGCTCATGCTTCAGTTTGAGGATATAGGATCACATGGAACCAAGATTTTAATATATAACTTGTGGTTGAATGATGAAGGAATATATGAATTGAGTTTTGATGATGACGCTGAGGATATCATGCTGAGAGATGAGGCCAAGCATGCAAATGGGCCGAAGTTGAACAAAAAAGTTGTTCAGCTTCAGTCGCATATTTCTTACCGCATCCGTTATTCTTTACGGGCATATGTTTCACTTTTGTATCTTAGAAAATTTCCGAACTTCAAAATCATACTAAGAGGAAAACCTGTGGACCATGTTGACATTACAGATGAGTTAAAACATTCAGAAGTTATTAATTACAAGCCCCAGCTGGCTGCGGCACATGTGGCTACGGTGGAGACGACCATTGGATTTATAAAGGAGTTTCCTGCTATTAATGTTTCTGGGTTTAATGTATACCACAAAAATCGCCTAATCAAGCCATTTTGGAAAGTAAGCCCAGATGGTTCATCTAAAGGGAATGGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCTGCACATGACAAGCAAGATTTTGAGAGATCACTGCTGTTCATACGGCTAGAAGGGAAGCTGAAACAAATGATAAATGATTACTGGAAGGGTCACTGTCAGTTAGTTGGACATCAGCCTATAGGTTACAGGCCACTTATGCAAAAGGAAGCCCAAATTCGACAATCAGCTGGGCATTTAACTAATTCACAAAATGAGTCTCTTGCTGATCCACAAGATATTTGGTCAGCAGCCAAGCACCAACAAGTTTTGAATTTAGATGAGCCAAATGAGGGTTTTCATGCAACCGGCAAGCAAAGTTCGACTTATGAGCAGTGTGGTATATCGAGTGGAGCTTCAGTGTCCAGATCTATTGATGAAATCTGTGAAGAAAACATCAAACTTTTCACGAGGTGTGAGGAGCACAGGCAAAAAGAGGCAGAGTTGAGAAAGACGGTGGAAGACTTGGAGAAGGATTTGAAAGAAATCGAAACCAAGCGTTCCTATATTGCTTCATTCTTAGAGGCCAAGAAGAAGCTGAAGAATGTATGCTGA 1845 0.4238 MSAVPKSEKNTVNVDSDDDASASAVMSDVHLPLQLQEQQNPPQSTSTPLVSESHSFWKAGDYVVGPTSKPSPSQGHLDHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQNGATFVKVDKLKNKKDNSPVLGFLDDGGGMDPNSLRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRATHLGRATQSVGLLSYTFLRKTGKDDVIIPMIDFDISGHWPEPIVYGSLDDWSSNLKTILDWSPFTSKDELMLQFEDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDEAKHANGPKLNKKVVQLQSHISYRIRYSLRAYVSLLYLRKFPNFKIILRGKPVDHVDITDELKHSEVINYKPQLAAAHVATVETTIGFIKEFPAINVSGFNVYHKNRLIKPFWKVSPDGSSKGNGVVGVLEANFIEPAHDKQDFERSLLFIRLEGKLKQMINDYWKGHCQLVGHQPIGYRPLMQKEAQIRQSAGHLTNSQNESLADPQDIWSAAKHQQVLNLDEPNEGFHATGKQSSTYEQCGISSGASVSRSIDEICEENIKLFTRCEEHRQKEAELRKTVEDLEKDLKEIETKRSYIASFLEAKKKLKNVC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2255 614 MobiDBLite consensus disorder prediction 1 51 - -
Psa4g2255 614 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 97 195 IPR036890 -
Psa4g2255 614 Pfam Morc6 ribosomal protein S5 domain 2-like 328 466 IPR041006 -
Psa4g2255 614 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g2255 614 Coils Coil 569 596 - -
Psa4g2255 614 Gene3D - 84 277 IPR036890 -
Psa4g2255 614 PANTHER PROTEIN MICRORCHIDIA 1-RELATED 6 612 - -
Psa4g2255 614 MobiDBLite consensus disorder prediction 32 51 - -
Psa4g2255 614 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 99 209 - -
Psa4g2255 614 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 6 612 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2255 Psa-Chr4 183091272 183104507 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2255 - - gmx:100781431 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2255 4 183091272 183104507 Psa4g2255 4 183091272 183104507 ECH