LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g2243	ATGAGGTATTCACGTTTTCTACAATTTTCACGCTTCCGCAAAACCCTAACTCAAAACCCTAATTTCACTTCTCCTCAAATTTCAAGACCCTATATTGTTTCACCAAATCAACACCAATGGAATCAAAAACCCCAATGCGAATCTACCTCCATACGCAATTACAACACCGCGTCACCGGATTCCGAAAAGGTGTCCGCGATTGTGGACGAACTCATGGGATTAACGCTACTGGAAGTGATGGACCTCGTTGATGTGATGAGAGAGAAAAAGGGGATCAACGAGCTTCCAATTATGATGTTGATGGTGCCCGGAATGGGAATCAGAGGCTTGCCGAAGGGTTTGGGTGGAGCTAAAGGTGGTGGCGGAGAAAAAGGAGAGGAGAAGAAGGTTGAGAAGACAGCGTTTGATGTGAAGCTTGATGGTTTTGATGCTGCGTCGAAGATTAAGATTATAAAGGAAGTTAGGACTTTTACTAGTTTGGGTTTGAAGGAAGCTAAGGATTTGGTGGAGAAAGCGCCTACTCTATTGAAGAAAGGTGTGACAAAGGAGGAGGCAGAGACTATTATTGCCAAGTTGAAGGAGGTTGGAGCAAAAGCTTCCATGGAATAA	609	0.4417	MRYSRFLQFSRFRKTLTQNPNFTSPQISRPYIVSPNQHQWNQKPQCESTSIRNYNTASPDSEKVSAIVDELMGLTLLEVMDLVDVMREKKGINELPIMMLMVPGMGIRGLPKGLGGAKGGGGEKGEEKKVEKTAFDVKLDGFDAASKIKIIKEVRTFTSLGLKEAKDLVEKAPTLLKKGVTKEEAETIIAKLKEVGAKASME*	203

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g2243	202	Pfam	Ribosomal protein L7/L12 dimerisation domain	63	101	IPR008932	GO:0003735\|GO:0005840\|GO:0006412
	Psa4g2243	202	SUPERFAMILY	ClpS-like	131	201	IPR014719	-
	Psa4g2243	202	Hamap	50S ribosomal protein L7/L12 [rplL].	61	202	IPR000206	GO:0003735\|GO:0005840\|GO:0006412
	Psa4g2243	202	Gene3D	-	129	201	IPR014719	-
	Psa4g2243	202	PANTHER	39S RIBOSOMAL PROTEIN L12	37	202	IPR000206	GO:0003735\|GO:0005840\|GO:0006412
	Psa4g2243	202	CDD	Ribosomal_L7_L12	62	201	IPR000206	GO:0003735\|GO:0005840\|GO:0006412
	Psa4g2243	202	Pfam	Ribosomal protein L7/L12 C-terminal domain	135	201	IPR013823	GO:0003735\|GO:0006412
	Psa4g2243	202	SUPERFAMILY	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	63	137	IPR036235	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g2243	Psa-Chr4	180266062	180268724	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g2243	K02935		-	gmx:100783589	221.476

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa4g2243	4	180266062	180268724	Psa4g2243	4	180266062	180268724	ECH