Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2238 ATGGGGGCTGAAGCTGAAATTGTAGACAAAAAATGGCGTTACACATGGGAAGCACAATCTCACACACCAATCCTCCGCTTATTCCTTTTCCCATTCTCCAAAACCCTAAACCTCTCTCTCCAACACCACAATTTCACCGTTCACCTTCATTCTCCACCCACTTTCCTCACCCTCACTTCTTCTTCCGATTCCCTCTCCCTTAGGGTTCCGGTTCCCAATGTCTTACTCGACGCCGAACTTCCTCCCACCGTCCGCTCATTCACTGACCACATCGAAGTCAAACTCCTCCTCTTACTCCCCGTCGATCACCCTGCCCTCTCCGCACTTCATCAAACCTCGCCGTTACCTCAACCTCTCCTAATCGAATATGATGTAGACAAACTGTCTTCAGCTGGAGAAGTTGAATTTGTTTGTAGAAGTTGCAGATACCATTTGACCAATAAACCTATCAGGAATTTTGTTGAAATGCCGTCAGCGAATTGGAGGGAGGTGGCTGACAATTGGTTTGGGGCTTGTTGTTGTTCCTTTGGAGGTATAAGCGAGAAGCTGGTGACGAGGTATGTGAATTCACACACGTGTGCACAAGAGATGTGCCTGTTGAGCTCTACATCTGTCACTTTTTGCAAGGATGATCTTGTGGAAAGTGACTTTCCTGAGCGCTGTGGACAGCTGCATGGGTGTGGTTATGTAGCCGATGATTTTGGAATCGATGTTGTTAGTGAAGGCATTGGGAATTTTGGGTTTAATGTGGAAAGAACTTCAACCTGCAGTGATGCTTGTGAAGTGAACTGTGCTTTTGATGAGAATGCAAGGGTTGGTCATCCTGGGAATGGAAAGGTTTCTTTGAATTTTAATGAAGTTGCCAAGAATGAACCTGATTGCAGTGATTTTGCCCGTATATGTCTAGATTTGAGTGACACTGAACACACGTCCAGTATTTCTAGTTGTTGTACTCATATAACGAGCACTCTAGGAGATGAAGACGGTGAACATCATTTATCTTCAAATGCTAGGAAGATTGAAACTGTGGAAATTGTGGGAAATCAGAAGTCTTTCCTTAATGGTTTTCTTGAAGATGTTTTCATGGCTAGATCATCAAATCTTTCAAAGAATATTGATTGGCATGAATTTACATGCCCGCAATGCACAACTCTCCTTGGAGCCTACCCGTGTTGTGAGGGATGTGCGCCAGTAGATGGAGGAATACGACTGTTCAAATGTTATATTTCAACCTGTCTGCCAGTTTTAGGATCAGGGGACATTTTCAGCAAGTACACAATGGACAAAATGTTTGCGAATCGGTTGGTGGAGTGTGCAAATGACGAGTCAACATTTCGGTTCGTTGTTAGAGATCTGAAAACCAAATCTCCTGTCCTGCAAATCATTCTTTTAAATCTAAATACTTGGTCCTGTTCTGGTTATTGCTTTAGTGCAGAGGACAAAGACCCAGATCCTAAATTGCAGCTACGGCCGGTCATCAAGGTCCTTTTTTCTGACTCCGAAGCTGCAACAGAATCCCAATCAAGGGTGATAGAGGAATGGGCAGCTAAAAACTCAGCTGAAGACATTTTCATGCTAACTTATCAAATACAAGATGTGGTGAATTCATTGATGTCTGCAAAAGATATATATCCTCCTTCATGTGCCTCCCTTCCTGGTTTAACGCTGTCATATGTGCAACGGTAG 1686 0.4371 MGAEAEIVDKKWRYTWEAQSHTPILRLFLFPFSKTLNLSLQHHNFTVHLHSPPTFLTLTSSSDSLSLRVPVPNVLLDAELPPTVRSFTDHIEVKLLLLLPVDHPALSALHQTSPLPQPLLIEYDVDKLSSAGEVEFVCRSCRYHLTNKPIRNFVEMPSANWREVADNWFGACCCSFGGISEKLVTRYVNSHTCAQEMCLLSSTSVTFCKDDLVESDFPERCGQLHGCGYVADDFGIDVVSEGIGNFGFNVERTSTCSDACEVNCAFDENARVGHPGNGKVSLNFNEVAKNEPDCSDFARICLDLSDTEHTSSISSCCTHITSTLGDEDGEHHLSSNARKIETVEIVGNQKSFLNGFLEDVFMARSSNLSKNIDWHEFTCPQCTTLLGAYPCCEGCAPVDGGIRLFKCYISTCLPVLGSGDIFSKYTMDKMFANRLVECANDESTFRFVVRDLKTKSPVLQIILLNLNTWSCSGYCFSAEDKDPDPKLQLRPVIKVLFSDSEAATESQSRVIEEWAAKNSAEDIFMLTYQIQDVVNSLMSAKDIYPPSCASLPGLTLSYVQR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2238 561 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 44 548 IPR019193 -
Psa4g2238 561 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 13 560 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2238 - - cam:101505599 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2238 4 179988772 179992184 Psa4g2238 4 179988772 179992184 ECH