Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2223 ATGGATTTAAAACAGGTAATACACATGAAAGGTGGCGACGGAGAAGAAGGTTATGCAAACAACTCCTTACTTCAGAGAAAGGTGATTTCTTTAACAAAATCTCTGAGAGACGAAGCCATAACCAATGTGTACCGCAACACAAAATCAGAAAGCTTAGGAATTGCAGATTTGGGTTGCTCTTATGGAGCAAACACATTTTTGGTGATTGCAGAAGCCATCAAAGCTGTGGAAAAGTTTTGTCAAGAACAGAAACAAAAATCTCCAGAATATAAAGTATATTTGAATGATCTACCCGGGAATGACTTCAACAATGTGTTTCGGTCTTTCGACGCGTTCAAAAAAGATCTTATTAGTGAAGTGAAAAATCCAATGGGTCCTTTCTATTTCTTTGGAGCTCCTGGTTCCTTTTATGATAAGCTTTTTCCGAATAAAAGTTTGCATTTTGTTCATTCTTCATATAGCCTTCAGTTTCTATCCAAGGTTCCTGAAGGTGTAGACAACAACAAAGGAAATATTTACTTGGCTAAGACAAGTCCTCCAAATGTTTTTAAAGCATATCTTGAACAATATCAAAGTGATTTTTCTTTCTTTCTCAAGTGTCGTTCGGAAGAATTAGTTGAAGGGGGTAGTTTGGTTGTGACTTTAATAGGAAGAATTGGTGAGGATCCAGTTTACAAGGATTGTTGTGCCGTTTGGGAAACCATGGCTATGGGTCTTAATGATATGGTCAAACAGGGAACCATAAAAGAAGAAAGTGTCAGCAGTTTCAACATTCCTATCTATTATCCATGTCAAGCTGAAGTGAAGAAGGAAATTGACACACAAGGATCATTTGACATCAATTATTTGGAAACTTCTGAAGTGAATTTTAGTGAGCTTGATAACTGGGACGGTTCTGATTTTACATCTAAAAAGCCTGAATCACTCAAAGATGCTGAATTCAATATGGAAAATTGTTTTAGGGCTGTGGCTGAACCTATGCTGATGGGTCATTTTGGTGAAAGTGTCACTAAAGAAGCTTTTAACCGATTTCTGAAAAATGCAGCTGATCATATGCCCAAAGATAAAACTAAGGTCACCAATATTACCATGTCATTGACTAGAAAGCCATGA 1113 0.3693 MDLKQVIHMKGGDGEEGYANNSLLQRKVISLTKSLRDEAITNVYRNTKSESLGIADLGCSYGANTFLVIAEAIKAVEKFCQEQKQKSPEYKVYLNDLPGNDFNNVFRSFDAFKKDLISEVKNPMGPFYFFGAPGSFYDKLFPNKSLHFVHSSYSLQFLSKVPEGVDNNKGNIYLAKTSPPNVFKAYLEQYQSDFSFFLKCRSEELVEGGSLVVTLIGRIGEDPVYKDCCAVWETMAMGLNDMVKQGTIKEESVSSFNIPIYYPCQAEVKKEIDTQGSFDINYLETSEVNFSELDNWDGSDFTSKKPESLKDAEFNMENCFRAVAEPMLMGHFGESVTKEAFNRFLKNAADHMPKDKTKVTNITMSLTRKP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2223 370 Gene3D - 6 355 IPR042086 -
Psa4g2223 370 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 368 IPR005299 GO:0008168
Psa4g2223 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 369 IPR029063 -
Psa4g2223 370 Pfam SAM dependent carboxyl methyltransferase 38 368 IPR005299 GO:0008168
Psa4g2223 370 Gene3D Vaccinia Virus protein VP39 21 356 IPR029063 -
Psa4g2223 370 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2223 Psa-Chr4 179538642 179540787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2223 K21483 - gmx:100813166 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2223 4 179538642 179540787 Psa4g2223 4 179538642 179540787 ECH