Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2215 ATGGAACTACACATGAATGGGAGCGATGAAGAAGTAAGCTATGCAAACAACTCCTCACTTCAGCGAAAGGTGATTTCTTTGACAAAAGCTCTGAGAGATGAAGCCATAACAAGTTTGTACTGCAACACACTGCCCAAAAGCTTGGCCATTGCTGACTTAGGTTGTTCTTCTGGACCAAACACTTTGTTAGTCATCTCACAAACTATCAAGGTTGTGGAAAATCTTTGTCGAAAATTTAATCAGAAATCTCCTGAATATAAAGTCTATCTTAATGATTTACCCGGAAACGACTTCAACAGTGTATTTAAGTCCCTTGACACCTTTAAGGAAAAACTAGTCGATGAATTGGAAACTAAAATGGGTTCTTGCTACTTCTCTGGGATTCCTGGTTCATTTTATGGCAGGATTTTCGCAGATAAAAGTATGGATTTTGTTCATTCCTCTTCCTGTCTTCATTGGCTATCAAAGGTTCCAGAGGGTGTTGACAACAACAACAAGGGTAATATTTATTTGTCAACTACAAGCCCTTCAAATGTCCTCGAGGCTTACTACAAGCAATTTCAAAAAGATTTTTCTCTTTTTCTCGAGTGTCGCGCACAAGAAATAGTTGAAGGTGGTCGCATGATTCTTACATTTGTAGGAAGAAAAAATGATGATCCATCAAACAAAGACTGTTGTCAAGTTTGGGATCTCATGACAATTGCTCTCAAGGACATGGTCTTGCAGGGAATCATTGACGAAGAGAAACTCGATACTTTCAACATCCCAAACTACTTTCCTTCTCCATCTGAAGTGAATTTTGAAGTTCTCGAGGAAGGATCATTTGCAATCGATAAACTAGAGATTTCTGAAGTGAATTGGAATGGTCGTGATAGTTGGGAAGCTTTGGACATTGGATCTGAAATGTCGAAATCGTTCAAAGACGAAGGATACAATATGGCACAATGCATTAGGGCTGGGACTGAACCTTTGCTAGTTTGTCACTTTGGTGATAGTGTCATTGAAGAGATTTTTGAACGCTATAAAAATATTTTAACTGATCGAATGTCCAAAGAGAGAACTAAGTTCATCTATCATACTTTATCGTTGACTAGAAAACAATGA 1104 0.3813 MELHMNGSDEEVSYANNSSLQRKVISLTKALRDEAITSLYCNTLPKSLAIADLGCSSGPNTLLVISQTIKVVENLCRKFNQKSPEYKVYLNDLPGNDFNSVFKSLDTFKEKLVDELETKMGSCYFSGIPGSFYGRIFADKSMDFVHSSSCLHWLSKVPEGVDNNNKGNIYLSTTSPSNVLEAYYKQFQKDFSLFLECRAQEIVEGGRMILTFVGRKNDDPSNKDCCQVWDLMTIALKDMVLQGIIDEEKLDTFNIPNYFPSPSEVNFEVLEEGSFAIDKLEISEVNWNGRDSWEALDIGSEMSKSFKDEGYNMAQCIRAGTEPLLVCHFGDSVIEEIFERYKNILTDRMSKERTKFIYHTLSLTRKQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2215 367 Pfam SAM dependent carboxyl methyltransferase 34 365 IPR005299 GO:0008168
Psa4g2215 367 Gene3D - 3 352 IPR042086 -
Psa4g2215 367 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 3 365 - -
Psa4g2215 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 366 IPR029063 -
Psa4g2215 367 Gene3D Vaccinia Virus protein VP39 17 353 IPR029063 -
Psa4g2215 367 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 3 365 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2215 Psa-Chr4 178794885 178796775 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2215 K21483 - gmx:106796370 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2215 4 178794885 178796775 Psa4g2215 4 178794885 178796775 ECH