Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2214 ATGGAACTACACATGAATGGGAGCGTTGAAGAAGCAAGCTATGCAAACAACTCCTCACTTCAGCTAAGGGTGATTTCTTTGACAAAAGCTCTGAGAGATGAAGCCATAACAAGTTTGTACTGCAACACACTGTCCAAAAGCTTGGCCATTGCTGACTTAGGTTGTTCTTCTGGACCAAACACTTTGTTAGTCATCTCAGAAACTATCAAGGTTGTGGAAAATCTTTGTCGAAAATTTAATCAGAAATCTCCGGAATATAAAGTCTCTCTTAACGATTTACCCGGAAACGACTTCAACAGCGTATTTAAGTCCCTTGACACCTTTAAGGCAAAACTAGTCGATGAATTGGAAATTAAAATGGGTTCTTGCTACTTCTCTGGGATTCCTGGTTCATTTTATGGCAGGATTTTCGCAGATAAAAGTTTGGATTTTGTTCATTCCTCTTACTGTCTTCATTGGCTATCAAAGGTTCCAGAGGGTGTTGACAACAACAAGGGTAATATTTATTTGTCAACTACAAGCCCTTCAAATGTCCTCGACGCTTACTACAAGCAATTTCAAAAAGATTTTTCTCTTTTTCTCGAGTGTCGCGCACAAGAAATAGTTGAAGGTGGTCGCATGATTCTTACATTTGTAGGAAGAGAAAATGATGATCCATCAAACAAAGAGTGTTGTCAAATTTGGGACCTCATGACAATTGCTCTCAAGGACATGGTCTTGCAGGGAATCATTGACGAAGAGAAACTCGATACTTTCAACATCCCAAACTACTTTCCTTCTCCATCTGAAGTGAATCTTGAAGTTCTCAAGGAAGGATCATTTGCAATCGATAAACTAGAGATTTCTGAAGTGAATTGGAATGGTCTTGATAGTTGGGAAGCTTTGGACATTGGATCTGAAATGTCGAAATCGTTCAAAGACGAAGGATACAATATGGCACAATGCATTAGGGCTGTGGCTGAATCTTTGCTAGCTTGTCACTTTGGTGACAGTGTCATTGAAGAGATTTTTGAACGCTATAAAAACATTTTAACTGATCGAATGTCTAAGGAGAGAACTAAGTTTATCAATCATACCTTATCGTTGACTAGAAAGCCATGA 1101 0.3878 MELHMNGSVEEASYANNSSLQLRVISLTKALRDEAITSLYCNTLSKSLAIADLGCSSGPNTLLVISETIKVVENLCRKFNQKSPEYKVSLNDLPGNDFNSVFKSLDTFKAKLVDELEIKMGSCYFSGIPGSFYGRIFADKSLDFVHSSYCLHWLSKVPEGVDNNKGNIYLSTTSPSNVLDAYYKQFQKDFSLFLECRAQEIVEGGRMILTFVGRENDDPSNKECCQIWDLMTIALKDMVLQGIIDEEKLDTFNIPNYFPSPSEVNLEVLKEGSFAIDKLEISEVNWNGLDSWEALDIGSEMSKSFKDEGYNMAQCIRAVAESLLACHFGDSVIEEIFERYKNILTDRMSKERTKFINHTLSLTRKP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2214 366 Gene3D Vaccinia Virus protein VP39 17 352 IPR029063 -
Psa4g2214 366 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 3 364 IPR005299 GO:0008168
Psa4g2214 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 365 IPR029063 -
Psa4g2214 366 Pfam SAM dependent carboxyl methyltransferase 34 364 IPR005299 GO:0008168
Psa4g2214 366 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 3 364 - -
Psa4g2214 366 Gene3D - 3 351 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2214 Psa-Chr4 178559207 178560613 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2214 K21483 - gmx:106796370 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2214 4 178559207 178560613 Psa4g2214 4 178559207 178560613 ECH