Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2192 ATGAGTTTAGAAATGGCAGCGGAATCATCGGAAGGTGAAGAAGAAGGAAAGTTAAGCGGCGGCAACCAGATATTGACTGTCGACGACGACCTCCGAGAATTGGGGAAAAAGGCCGCCTGGAGCGTCAGTTCCTGCAAACCCGGCAACGGCGTTTCTTCTCTTCGAGATGACAATCTCGAGACCTATTGGCAATCCGATGGAGCTCAACCTCATTTTGTTAACATTCAATTCCAAAAGAAAGTTCGATTACAATTAGTTGTACTATATGTGGATTTCAAGCTTGATGAGAGTTACACTCCCAGTAAGATTTCGATTCGTGCCGGAGACGGCTTTCACAACCTCAAGGAGATAAAGGCTGTGGAACTTGTGAAACCAACTGGTTGGCTTTATCTTTCATTATCCGGACTTGATCCCCGTGAAACTTTTGTCAACACATTTATGTTACAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTAGACCGAACCCCATTCCACAGCAGCCATTTCAATTTACTTCAAGAGAGTTCATCACCTATTCTACTATAAGATGA 591 0.4399 MSLEMAAESSEGEEEGKLSGGNQILTVDDDLRELGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGLDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTIR* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2192 196 CDD APC10 32 171 IPR016901 GO:0005680|GO:0031145
Psa4g2192 196 ProSiteProfiles DOC domain profile. 10 196 IPR004939 -
Psa4g2192 196 PIRSF APC10 6 196 IPR016901 GO:0005680|GO:0031145
Psa4g2192 196 SUPERFAMILY Galactose-binding domain-like 26 172 IPR008979 -
Psa4g2192 196 Pfam Anaphase-promoting complex, subunit 10 (APC10) 25 193 IPR004939 -
Psa4g2192 196 PANTHER ANAPHASE-PROMOTING COMPLEX 10 12 196 IPR016901 GO:0005680|GO:0031145
Psa4g2192 196 MobiDBLite consensus disorder prediction 1 22 - -
Psa4g2192 196 Gene3D - 2 173 - -
Psa4g2192 196 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 12 196 - -
Psa4g2192 196 SMART APC10_2 31 195 IPR004939 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2192 K03357 - gmx:100526925 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2192 4 177327848 177330258 Psa4g2192 4 177327848 177330258 ECH