Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2186 ATGAGTTTCAGAGAAGAAAGCGGCGATGGAAGGGAACTTCAGAAACCGTTCCTTCATACGGGAAGTTGGTATAAAATGAGTTCCAGACAATCCAGCGTTGCCGGCTCCTCCACTACCCAGGTTTTGCGCGATGGTTCAGTTTCTGTTCTCTTCTGTGTCCTCATCGCTGCTTTGGGTCCCATTCAATTCGGTTTCACGTGTGGATATTCTTCTCCCACGCAGCAAGCTATAATCAAAGATCTAAATCTCTCGGTTTCAGAGTTTTCTCTGTTTGGATCTTTATCCAATGTGGGTGCCATGGTGGGAGCTATAGCCAGTGGTCAGATAGCAGAATACGTTGGACGCAAAGGGTCATTGATGATTGCTTCAATTCCCAATATAATAGGGTGGCTCGCCATTTCATTTGCCAAAGACTCTTCCTTTTTGTTTATGGGGAGGTTATTGGAAGGTTTTGGTGTTGGGATTATTTCTTATGTGGTGCCTGTTTATATAGCTGAGATAGCACCTGAGAACATGAGAGGTAGCCTTGGATCAGTGAACCAGCTCTCTGTTACAATTGGAATAATGCTGGCTTATCTGTTAGGCCTTTTTGCCAACTGGAGAGTGCTTGCGATCCTAGGAATTTTGCCTTGTACAATATTAATACCTGGATTATTTTTCATACCAGAATCTCCTAGATGGTTGGCCAAGATGGGGATGATGGATGAGTTCGAGACTTCGTTGCAAGTGTTGAGAGGATTTGACACAGATATATCTGTTGAAGTACATGAAATTAAGAGAGCTGTGGCATCAACTGGAAAAAGAGCTACAATCCGATTTGCAGATCTCAAGAGGAAAAGATATTGGTTCCCTTTATCGATAGGAATTGGATTACTTGTACTTCAGCAATTGAGTGGTATCAATGGAGTTTTGTTCTATTCAACTAGCATCTTTGCAAATGCAGGAATCTCATCCAGCAATGTTGCTACCGTTGGACTTGGAGCTATTCAGGTCATAGCTACTGGAATAGCTACTTGGTTGGTGGACAAAAGTGGGCGGAGGCTGCTCCTAATAATATCCTCGTCTTTAATGACAGCTAGCCTTCTCGTTGTTTCTATAGCATTCTATCTGGAGGAAGTTGTATCAAAGGATTCACATTATTTCAGCATTTTGGGAATGATATCCGTTGTTGGCCTTGTGGTTATGGTAATTGGGTTCTCTCTAGGACTTGGACCAATCCCTTGGCTTATAATGTCCGAGATACTTCCAGTGAATATAAAGGGCCTTGCTGGAAGTACAGCAACCATGGCTAATTGGCTAATTTCGTGGATCGTCACAATGACTGCAAACTTGCTTTTGACTTGGAGCAGTGGAGGTAGCAAAATTCCTCGCTCAGGGTAG 1380 0.4312 MSFREESGDGRELQKPFLHTGSWYKMSSRQSSVAGSSTTQVLRDGSVSVLFCVLIAALGPIQFGFTCGYSSPTQQAIIKDLNLSVSEFSLFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIASIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEIAPENMRGSLGSVNQLSVTIGIMLAYLLGLFANWRVLAILGILPCTILIPGLFFIPESPRWLAKMGMMDEFETSLQVLRGFDTDISVEVHEIKRAVASTGKRATIRFADLKRKRYWFPLSIGIGLLVLQQLSGINGVLFYSTSIFANAGISSSNVATVGLGAIQVIATGIATWLVDKSGRRLLLIISSSLMTASLLVVSIAFYLEEVVSKDSHYFSILGMISVVGLVVMVIGFSLGLGPIPWLIMSEILPVNIKGLAGSTATMANWLISWIVTMTANLLLTWSSGGSKIPRSG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2186 459 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 14 453 - -
Psa4g2186 459 PANTHER - 14 453 - -
Psa4g2186 459 ProSitePatterns Sugar transport proteins signature 2. 148 173 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa4g2186 459 Pfam Sugar (and other) transporter 53 450 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa4g2186 459 Gene3D MFS general substrate transporter like domains 44 455 IPR036259 -
Psa4g2186 459 PRINTS Sugar transporter signature 60 70 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 PRINTS Sugar transporter signature 143 162 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 459 IPR020846 GO:0022857
Psa4g2186 459 CDD MFS_GLUT6_8_Class3_like 50 453 IPR044775 GO:0008643|GO:0051119
Psa4g2186 459 SUPERFAMILY MFS general substrate transporter 50 449 IPR036259 -
Psa4g2186 459 TIGRFAM SP: MFS transporter, sugar porter (SP) family 34 442 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa4g2186 459 ProSitePatterns Sugar transport proteins signature 1. 106 123 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2186 Psa-Chr4 176262925 176270170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2186 1 453 Organic Solute Cotransporters AT1G75220 77.974 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2186 K03444 - gmx:100813399 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2186 4 176262925 176270170 Psa4g2186 4 176262925 176270170 ECH