Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2180 ATGGTGAATCTTGTGGAAGCACAAAAACCATTGATGCATGCTCTAATGAAAATGGCAGGGATAAGACCCTACACAGTAGAGATAGAATCAGGAACCGAAATGAGTTTCTGGGTACCTTCAGAAACCATAACAAAACCCAAGAAAAAAGAAGAAAAACCCAAACTCATCGCGAAACCCACCAAGCCCGTGGTCGTTCTAGTCCACGGTTTCGCCGCAGAGGGAATAGTCACATGGCAGTTTCAAGTTGGCGCGTTGACAAAAAAGTACGCTGTTTATGTTCCGGATCTTCTGTTCTTCGGAGGTTCTGTCACAGACAAAACAGACAGATCGCCGAGGTTTCAAGCGGAGTGTTTGGCAGCGGCGTTGAGGAAACTCGGTGTGGAGAAATGTATCGTTGTCGGTTTTAGCTACGGCGGAATGGTGGCGTTTAAGATGGCTGAGATGTTTCCTGAATTGGTGGAAGCTATGGTTATATCAGGATCCATTTTGGCTATGACTGATAGCATTAGTGTTAGTAGTTTGCAAGAACTTGGATTTTCTTCTTCTTCTGAACTTTTGTTGCCAAACTCTGTCAAAGGTCTTAAAACGCTTTTGTCGATTGCTGCTTATAAAAAGCTTTGGTTTCCAAATCGTTTGCACAAAGATTTTCTTCAGGTGATGTTCACTAATAGAAAAGAGCGAGGTGAACTATTAGAAGGGTTAGTAATTAGCAATAAAGAAGTTGACATTCCAAATTTCTCACAGAGGATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTTGGAGATGACACAACTTTTGAAGGCATAAAGAAAGCTGGTCATCTTGTTCATTTGGAGAGACCATGCGTCTACAATAGATGCCTCAAGCATTTTATTGCTTCCTTCTTGGCGTCAAATAAAACC 942 0.413 MVNLVEAQKPLMHALMKMAGIRPYTVEIESGTEMSFWVPSETITKPKKKEEKPKLIAKPTKPVVVLVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSVTDKTDRSPRFQAECLAAALRKLGVEKCIVVGFSYGGMVAFKMAEMFPELVEAMVISGSILAMTDSISVSSLQELGFSSSSELLLPNSVKGLKTLLSIAAYKKLWFPNRLHKDFLQVMFTNRKERGELLEGLVISNKEVDIPNFSQRIHLLWGENDQIFKLELAQNMKEQLGDDTTFEGIKKAGHLVHLERPCVYNRCLKHFIASFLASNKT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2180 314 SUPERFAMILY alpha/beta-Hydrolases 60 306 IPR029058 -
Psa4g2180 314 Pfam alpha/beta hydrolase fold 62 175 IPR000073 -
Psa4g2180 314 Gene3D alpha/beta hydrolase 8 308 IPR029058 -
Psa4g2180 314 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Psa4g2180 314 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Psa4g2180 314 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Psa4g2180 314 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Psa4g2180 314 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Psa4g2180 314 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Psa4g2180 314 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Psa4g2180 314 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Psa4g2180 314 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
Psa4g2180 314 PANTHER SI:DKEY-122A22.2 2 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2180 Psa-Chr4 176159630 176162378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2180 - - gmx:100816070 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3619 2 390949146 390965363 Psa4g2180 4 176159630 176162378 ECH
Psa4g2180 4 176159630 176162378 Psa4g2180 4 176159630 176162378 ECH
Psa2g3618 2 390884447 390884941 Psa4g2180 4 176159630 176162378 PCT