Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2171 ATGTGGCGACGGAGCTTTACCACCACCAGCGCCACCGCATTAAAGGACAAAAAGTGGGACGCACTGATCATTGGCGGCGGCCATAACGGCCTCACAGCAGCAGCTTACCTCGCACGTGGAGGTCTCTCAGTTGCCGTCCTCGAGCGCCGCCACACAATAGGAGGCGCCGCCGTAACCGAGGAGCTAATTCCAGGTTTCAAGTTTTCCCGTTGCAGTTACCTCCAAGGCCTTCTCCGGCCGGCAGTTATCAATGAACTCGAATTGGCAAAGCACGGATTGAAGCTTCTGAAGAGAAATCCGTCGTCGTTTACGCCTTGTCTGGATGGACGCTACCTTCTCTTAGGAGCTGATAAGGATCTCAATCACTCTCAGATTTCCAAATTCTCACAAGCTGATGCAGAAGCATATCCAAAATATGAGAGTCAGCTTGAGAAATTCTGTAAATTCATGGATCTAGTTCTGGATTCGTCTCCACCTGAGTCTTTACAGCATAAATCATCTCTTAATGAGCAACTGAAGAATAAATTACAGAATTCAGTATTTTGGGCTACTTGTTTGCGGCATGCAGCCTCCATGGGGCAAAAAGATATGGTGGAATTCATGGACCTTTTGTTGTCCCCAGCTTCTAAAGTTTTGAATAACTGGTTTGAGACAGATGTTCTGAAGGCAACACTTGGAACAGATGCTGTGATCGGATCAACTGCCAGTATCCACACCCCGGGAAGTGGTTATGTTCTGCTACATCTTGTAATGGGAGAAACCGATGGAGAGCGTGGAGTTTGGTCATATGTTGAAGGTGGAATGGGTTCAATATCCAATGCCATTGCTAGTGCTGCTGTCACAGCTGGAGCACATGTTGTGACGAATGTTGAGGTGTCTCAGTTGTTGATTAAAAACTCTAGCACTGTCGATGGGGTGATTCTGGCTGATGGTACCGAAGTGCATGCTTCAGTTGTTCTGTCTAATGCAACACCTTATAAAACTTTCATGGAATTAGTGCCCAACAATGTCCTCCCAGATGATTATTTTCGGGCAATTAAGCACTCCGACTACAGCTCTGCCACCACAAAAATAAATGTAGCAGTTGATAAATTGCCTCAATTTCAGTGTTGCAAATCAAATCATTTTCATTCTGGCCCTGAGCATGTTGGCACTATTCATATAGGTTCAGAGAGCATGGAGGATATTCATTCTGCATCTCATGACGCGGCGAATGGAATACCATCAAGAAGACCGGTCATTGAGATGACAATTCCTTCCGTATTGGACAAAACTATATCTCCACCAGGTATGCATGTGATAAATCTGTTTGTGCAGTATACACCCTACAAACCATTGGACGGGGACTGGCAAGATCATGACTACAGAGAGTCATTTGCACAAAAATGCTTCACATTGATTGATGAATATGCACCCGGTTTCAGCACATCAGTCATTGGTTATGACATGCTGACTCCACCAGATCTTGAAAGAGAATTCGGTTTGACAGGAGGAAATATATATCATGGTGCTATGGGTTTGGATTCTCTTTTTCTCATGCGTCCTGTAAAAGGATGGTCAAACTATAAAACACCACTTAAAGGTTTATACTTATGTGGAAGTGGCGCACACCCCGGCGGTGGAGTTATGGGAGCACCTGGACGCAATGCTGCCCATTTAGTTCTTCAGGATGTCAGAAAAATATGA 1686 0.4514 MWRRSFTTTSATALKDKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHTIGGAAVTEELIPGFKFSRCSYLQGLLRPAVINELELAKHGLKLLKRNPSSFTPCLDGRYLLLGADKDLNHSQISKFSQADAEAYPKYESQLEKFCKFMDLVLDSSPPESLQHKSSLNEQLKNKLQNSVFWATCLRHAASMGQKDMVEFMDLLLSPASKVLNNWFETDVLKATLGTDAVIGSTASIHTPGSGYVLLHLVMGETDGERGVWSYVEGGMGSISNAIASAAVTAGAHVVTNVEVSQLLIKNSSTVDGVILADGTEVHASVVLSNATPYKTFMELVPNNVLPDDYFRAIKHSDYSSATTKINVAVDKLPQFQCCKSNHFHSGPEHVGTIHIGSESMEDIHSASHDAANGIPSRRPVIEMTIPSVLDKTISPPGMHVINLFVQYTPYKPLDGDWQDHDYRESFAQKCFTLIDEYAPGFSTSVIGYDMLTPPDLEREFGLTGGNIYHGAMGLDSLFLMRPVKGWSNYKTPLKGLYLCGSGAHPGGGVMGAPGRNAAHLVLQDVRKI* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2171 561 PANTHER PHYTOENE DEHYDROGENASE 1 560 - -
Psa4g2171 561 Gene3D - 18 125 IPR036188 -
Psa4g2171 561 Gene3D - 222 366 IPR036188 -
Psa4g2171 561 Pfam Flavin containing amine oxidoreductase 30 363 IPR002937 GO:0016491
Psa4g2171 561 SUPERFAMILY FAD/NAD(P)-binding domain 16 437 IPR036188 -
Psa4g2171 561 PANTHER FAD/NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2171 Psa-Chr4 175413640 175421142 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2171 - - gmx:100781247 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2171 4 175413640 175421142 Psa4g2171 4 175413640 175421142 ECH