Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2158 ATGGAAGAAGAAGACGAGGAAATAAATCCTTTCACAAGCCTCCTAACCGACGACGATGATAAACCCATTGCATTCACTACCATACAAGACGATTTACCAAAGCAAGAATTGCTTCAAAAACATTTCCTCCGTTCGATTCAATCAACGGTTATAATTCGTCAGCTCCCATCGGAGGGTATCTCCTTCCAGCTCTGGCCCACCGCCACCTCTCTTGTCTCCCTCCTCGACAACCACCGCATAAATCCTACAAACAGCCCTCTCTCCACCGCCCTCGCAGCAAGCAACACTCCTCTGAGGATCCTGGAACTTGGCTCCGGCACCGGAATAGTCGGTATAGTCGCCGCCGCCACTCTCGGCAGCAACGTAACCCTAACAGATCTCCCTCATGTAGTTCCCAATCTTAAGTTCAACGCGGAAGCCAACGCGGGTGTTGTGGGGTCCAGCGGCGGGACAGTTACATTTGCACCGCTGAGGTGGGGCCACGCTGATGACGTGGAGATGATTGGGAGAGAGTTTGATGTTATCGTAGCTTCGGATGTAGTGTATCATGATCATCTCTATGAGCCGTTGATTGAAACGCTGCGTTTGTTGTTGATTGGGAAGAAAATTGTGTTTTTGATGGCTCATACGAAGAGGTGGAAAAAAGAGTCGGTTTTCTTCAATAAAGCGAGGAAGCACTTTTTCATTGATGTTTTGCATGTTGACACTCCTTGCAATGGTTCTAGAGTTGGTGTTGTTGTTTATCGTTTTGTTGGGAAGAGTTAG 765 0.481 MEEEDEEINPFTSLLTDDDDKPIAFTTIQDDLPKQELLQKHFLRSIQSTVIIRQLPSEGISFQLWPTATSLVSLLDNHRINPTNSPLSTALAASNTPLRILELGSGTGIVGIVAAATLGSNVTLTDLPHVVPNLKFNAEANAGVVGSSGGTVTFAPLRWGHADDVEMIGREFDVIVASDVVYHDHLYEPLIETLRLLLIGKKIVFLMAHTKRWKKESVFFNKARKHFFIDVLHVDTPCNGSRVGVVVYRFVGKS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2158 254 Gene3D Vaccinia Virus protein VP39 33 250 IPR029063 -
Psa4g2158 254 PANTHER - 36 251 - -
Psa4g2158 254 CDD AdoMet_MTases 99 205 - -
Psa4g2158 254 Pfam Lysine methyltransferase 48 225 IPR019410 -
Psa4g2158 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 232 IPR029063 -
Psa4g2158 254 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 36 251 IPR019410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2158 Psa-Chr4 174975361 174976827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2158 K21805 - gmx:100796318 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2158 4 174975361 174976827 Psa4g2158 4 174975361 174976827 ECH