Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2155 ATGTTTCTTCTTAGAAAGCAAACCCAGAATCAGCCAGAGAATGGTTCCTCAAATCATGATGCTAAGGTGGCTGAACTAAGAGCTGCTATTGGGCCCTTATCCGGGCGTCAATTGATGTATTGCACGGATGCATGTTTAAGGAGATATTTAGAAGCGCGGAACTGGAATGTTGATAAAGCTAAGAAAATGCTGGAGGAATCACTCAAGTGGAGATCTACTTATAAGCCTGAGGAAATCCGATGGGCTGAAGTAGCACATGAGGGCGAGACGGGAAAAGTATCCCGAGCTAACTTTCATGATAGACTTGGGAGGACAGTGCTTATTATGAGACCAGGGATGCAGAACACAACATCAGCAGAAAATAATATCAAGCATTTAGTCTATCTGTTGGAAAATGCTGTACTTAATCTTTCCGATGGTCAAGAACAAATGTCATGGTTGATAGACTTCACAGGATTTTCATTTGGCACAAATGTTGCTGTTAAAACTGCCCGTGATATTATTCACATTTTGCAAAACCACTATCCAGAAAGACTTGCTATTGCTTTTCTGTATAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCTGTAAAATACTTCCTGGATCCCAAGACAGCCCAGAAGGTAAAGTTTGTTTATCTCAACAATAAAGACAGCGTGGAGCTGATGAAATCACTCTTCGACATGGAAAATCTTCCTAGTGAATTTGGCGGAAAAGCTACTTTAAAGTATGATCATGAAGAGTTCTCACTGTTAATGACTGAGGATGATGTGAAAACTTCAAAGTTCTGGGGACTTAATGATGAGAAGCCCTTCACTACTAAGAATGGCCATGGTGGGGCAGAGGTAGCACCAGAACCTGTTGGCAGTATAGTTAGTTGA 885 0.4124 MFLLRKQTQNQPENGSSNHDAKVAELRAAIGPLSGRQLMYCTDACLRRYLEARNWNVDKAKKMLEESLKWRSTYKPEEIRWAEVAHEGETGKVSRANFHDRLGRTVLIMRPGMQNTTSAENNIKHLVYLLENAVLNLSDGQEQMSWLIDFTGFSFGTNVAVKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKYFLDPKTAQKVKFVYLNNKDSVELMKSLFDMENLPSEFGGKATLKYDHEEFSLLMTEDDVKTSKFWGLNDEKPFTTKNGHGGAEVAPEPVGSIVS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2155 294 CDD SEC14 99 240 IPR001251 -
Psa4g2155 294 SMART sec14_4 87 242 IPR001251 -
Psa4g2155 294 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g2155 294 SUPERFAMILY CRAL/TRIO N-terminal domain 8 82 IPR036273 -
Psa4g2155 294 Pfam CRAL/TRIO, N-terminal domain 22 66 IPR011074 -
Psa4g2155 294 SUPERFAMILY CRAL/TRIO domain 82 258 IPR036865 -
Psa4g2155 294 MobiDBLite consensus disorder prediction 1 18 - -
Psa4g2155 294 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Psa4g2155 294 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 6 289 - -
Psa4g2155 294 PANTHER GH16843P 6 289 - -
Psa4g2155 294 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Psa4g2155 294 Pfam CRAL/TRIO domain 98 239 IPR001251 -
Psa4g2155 294 Gene3D - 3 271 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2155 Psa-Chr4 174869776 174873645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2155 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 27.317 1.51e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2155 - - gmx:100782334 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2155 4 174869776 174873645 Psa4g2155 4 174869776 174873645 ECH