Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2145 ATGAGATATAGGATTTCGTATTTGATGGACGAGATCTGGGAGAGGGCTGTGGAAACGGCGTTAGAAGGCGAGAAAGACCACGCCTCTGCTCGAACGTTAACCCTTGACGGCGCCGTTAAGTGTGTACAAGGACGTTTACCTCCTCCGAGCCTTCTTGAAAGGTTCCAGAACCTTCAGCACCTTTCGATTGCAAACGTTGGTGTTTCTTCTCTGGAGCAGTTCCCGAGGCTCCGGAGTCTTCAGAAGTTGAACCTCTCCGACAACCGGATCGCCGGAGGACTTGAGTTTTTGGTTCAAGCGGGGCTCGATTCGCTGCGTGACCTCGATCTATCCAATAATAGGATTCAGTCGATCGAGGATCTTGCTCCGTTAGCGCAGTTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTCCTGTTACTCGTGTTAAGGACTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGCTTAAGTTCTTGGATAAGATGGATGCGGAGGAGAATGAGAGGCCGGAGTCCGATGAGGAGGAGGAGGATGAAGAGGAGGAAGAAGAGGAGGAGGATCCTGGGAGTGGTGAGATTGATGGAGGCGAAGAAGATCGACAGTTTGGGATGAGCAATGGTCATAGTGAGGGTGTTGATGGAGTTGTTGATGCTGATGAGGAAGATGAGAGTGATGCGGATGAGGAGGTGACCGAGACTTCAAGAGGGAGGGTGAATGGGTTGAACCATCAGGAGAATGGGTTCCATGTTGCCCCTGCTGTGGGTGATGATGTGGAGGAGGAAGATGATGATGATGACGACGATGATGATGATTCTGGTGAAGAGATTGATGAGGAGGAGGGTGATGATGATGATGTGGTTGAGGTTCATGAGATTGATGATAGTGATGACGACGATGATGGGGTCGAGTTTGATGAGGATGATGACAATGATGATGATGATGAAGAGGTTGATAACGATGAAGGGGATTTTGCTGAACCCGAGAGTACTTCTGGACGGTTGGTGAGTACTGAAGGTGAGATCGATGGGCACGAGCAAGGGGAGGAAGATGGAGACGAAGATGACAACGGGGAGACTGGTGAAGATGAGATGGGAGTAGAAGAAGAAGATGATGACGATGATGATGGAGAGTTTGAAGATGATGATGAAGAAGAAGACTGTGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGATGATGCTGCTGACATTTTCGAAGTGGAAAACGAGGATGGTGAAGAGGAGGAGGAAGTTGACGATGAGGAGGACGACGATGTTCAGGAGGTGTTGCCTCCTGCCTCTTCACACCCCAAGAGGAAGAGGGACAATGATGGTGAAGATGACGAGGAGGATGAAGATGAAGCAGCACTGACAAAGCCATCCAAGAAGCACCATTGA 1413 0.4926 MRYRISYLMDEIWERAVETALEGEKDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQSIEDLAPLAQLKLVSLDLYECPVTRVKDYRSRVFGLIKSLKFLDKMDAEENERPESDEEEEDEEEEEEEEDPGSGEIDGGEEDRQFGMSNGHSEGVDGVVDADEEDESDADEEVTETSRGRVNGLNHQENGFHVAPAVGDDVEEEDDDDDDDDDDSGEEIDEEEGDDDDVVEVHEIDDSDDDDDGVEFDEDDDNDDDDEEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEEEDDDDDDGEFEDDDEEEDCGAGYLVQPVGQAEALNDDAADIFEVENEDGEEEEEVDDEEDDDVQEVLPPASSHPKRKRDNDGEDDEEDEDEAALTKPSKKHH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2145 470 Coils Coil 162 182 - -
Psa4g2145 470 Gene3D Ribonuclease Inhibitor 12 178 IPR032675 -
Psa4g2145 470 MobiDBLite consensus disorder prediction 256 325 - -
Psa4g2145 470 SMART LRR_sd22_2 102 123 - -
Psa4g2145 470 MobiDBLite consensus disorder prediction 215 229 - -
Psa4g2145 470 MobiDBLite consensus disorder prediction 167 193 - -
Psa4g2145 470 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 458 IPR045081 -
Psa4g2145 470 MobiDBLite consensus disorder prediction 163 470 - -
Psa4g2145 470 SUPERFAMILY L domain-like 48 164 - -
Psa4g2145 470 MobiDBLite consensus disorder prediction 406 433 - -
Psa4g2145 470 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Psa4g2145 470 MobiDBLite consensus disorder prediction 343 388 - -
Psa4g2145 470 Pfam Leucine-rich repeat 64 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2145 - - jre:108997540 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2145 4 172729763 172733761 Psa4g2145 4 172729763 172733761 ECH