Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2102 ATGGGGCTTGAAGGTTTGATTCCAAGGCATAATCGTTCAAAGAGCTTTCCTGATATGAAAACAGTCAAGGAGGATATTTCAGATAGCCTTGAGACTTCAGATCAAACAAAGCTGGATGCAGGTTACCTCACAGAATGCAGTGAAGCTAATAAAAAACAAAGCCCCGTGAATAATGTTCGAAATACTCTAAAGCAAGAGATTTTACAATTAGAGAAAAGACTAGAAGACCAATTTAAGGTTAGATGCACATTAGAAAAGGCACTTGGATACAGACCGATATCTCTTGTTAATCCAGATGACATGACAATACCAAAGCCAACCACAGATTTAGTTAAAGAAATCGCAGTTTTAGAGTTAGAAGTTGTATATTTGGAACAATATCTTCTCTCCTTATACCGTAAAGCATTTGAGCAACAACTATCTCCCGCCGTGGCTTCATCTACCGTGGAGGAAAGTGAAAAGTCTCCTCCTCTAACAACACCTAGAGATAGATTCCTTGAAGTTTCTCCGTGTCTAACAATAAAAGGATATTCTGATGAACAATGTATTGATCACAAGCTTGATACTAATAAAAAAGAATGTAATGAATATGGACTCGAGACTCCTGATAAAGAATGCATTGTACGTCATCCAGAAGAAAAACATTTAGACTCCGGTGTTCATCGTTGTCACTCCTCGTTATCTCAATATTCGGCAAGAGTATCTCCTCCAGAAGAAGCATTGACCGATTCTTTACGCGCCTGTTATTCTCAACCCTTGTCCATGGTGGAGTTTGCCGAAAACGTTGATGCTTCAACAAAAATAATCAGTCTAGCAGAACATCTCGGTACTCGAATATTTGATCATATTCCAGAAACAGCTAATAGGCTTTCCGAGGATATGGTTAAATGTATATCAGCTATATATTACAAACTTTCAGACTCACCTGCAACAAATCCCGGCCTTTCATCTCCCAGTACTTCAACAAGTGCCTTTTCTATTGGAGATCAAGGAGACATGTGGAGTCCAGGATTCAAAAATAACTCATCTTTTGATGTAGAGTTAGAGAATCCTTTTCATGTTGAAGGACTCAAGGAGTTTAGCGGGCCTTATAGCACCATGGTTGAGGTATCGTGGATTTATAAAGTGAATCAGAAATTGGGTGATACAGAACAGTTGCTCCAGAATTTCAGGTCACTTATTGGTCAATTAGAAGAAGTAGATCCGGGGAAGTTGAAACCCGAGGAGAAGTTAGCTTTCTGGATCAACGTACACAATGCTTTAGTGATGCATGCTTTTTTGGCTTATGGAATTCCCCAAAACAATGTGAAAAGGGTCTTTCTTCTGTTGAAGGCTGCATATAATGTTGGAGGTCATACCGTCAGTGCAGACACAATACAGAATACTATACTCGGGTGCCGGATGTCTCGTCCTGGACAGTGGTTCCGCGTGTTCTTTTCTTCGAGAACAAAATTCAAAGCGGGAGATGGACGACAAGCGTATGCAATCGAGCAGCCTGAGCCTCTTCTTCACTTTGCACTTTGTTCAGGAACCCACTCTGATCCAGCGGTACGTGTATATACACCGAAAAGAGTACATCGAGAACTAGAAGTTGCGAAGGAAGAGTACATTAGAGCCACATTTGGGGTAAGCAAAGACCAGAAAATACTTCTACCGAAGATTGTAGATTCATTCTCCAAGGAATCAGGTTTGTCCCATGCCAGTCTTACAGAGATGATCCAACAGTCTCTACCTGAGTCTCTGAGAAAAAGTATCAAGAAATGTCATCTTGCGAAGTCGGGAAAGAGCATAGAATGGATTCCGCACAACTTTACGTTTCGATATCTCATACCTAAGGAGCTGGTAAAATAA 1851 0.4057 MGLEGLIPRHNRSKSFPDMKTVKEDISDSLETSDQTKLDAGYLTECSEANKKQSPVNNVRNTLKQEILQLEKRLEDQFKVRCTLEKALGYRPISLVNPDDMTIPKPTTDLVKEIAVLELEVVYLEQYLLSLYRKAFEQQLSPAVASSTVEESEKSPPLTTPRDRFLEVSPCLTIKGYSDEQCIDHKLDTNKKECNEYGLETPDKECIVRHPEEKHLDSGVHRCHSSLSQYSARVSPPEEALTDSLRACYSQPLSMVEFAENVDASTKIISLAEHLGTRIFDHIPETANRLSEDMVKCISAIYYKLSDSPATNPGLSSPSTSTSAFSIGDQGDMWSPGFKNNSSFDVELENPFHVEGLKEFSGPYSTMVEVSWIYKVNQKLGDTEQLLQNFRSLIGQLEEVDPGKLKPEEKLAFWINVHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGHTVSADTIQNTILGCRMSRPGQWFRVFFSSRTKFKAGDGRQAYAIEQPEPLLHFALCSGTHSDPAVRVYTPKRVHRELEVAKEEYIRATFGVSKDQKILLPKIVDSFSKESGLSHASLTEMIQQSLPESLRKSIKKCHLAKSGKSIEWIPHNFTFRYLIPKELVK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2102 616 Coils Coil 60 80 - -
Psa4g2102 616 PANTHER UNCHARACTERIZED 7 616 - -
Psa4g2102 616 PANTHER TRANSPORTER, PUTATIVE-RELATED 7 616 - -
Psa4g2102 616 Pfam Leucine-zipper of ternary complex factor MIP1 57 138 IPR025757 -
Psa4g2102 616 Pfam Protein of unknown function, DUF547 404 537 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2102 Psa-Chr4 163364834 163369376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2102 - - gmx:100816025 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3710 2 396998695 397002964 Psa4g2102 4 163364834 163369376 PCT