Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2085 ATGGCGCAATGGTGGCGCTCCGCCGCCGGGCATCTCCGATCAGTGAAGGCAAACTGCACCTCCTCCTTATCGTCACTCCGTTGTAGTCATTACCACACAATCCAAGCAATCCCGAGAGAAAGCACGGGCAATAAAGTCGCAGCCAGAGACAGAATGCAAGGTCGAATACCGGCCGTCGTTTTCTTCCAGAATCTTCTTGACAAAACCCCCGACTCACGATCCACGTCAAGGAAACATTTACTCACCGTTGAGAAGAAGCAGATTAAGGCAGTGCTCAATTCCATTGAAGCTCCGTTCTTCTGTTCCACCCGTTTTCCGCTCCAGATTCGTGCTGGATCCGGATCCACTCATTTGCTCGAAAGCGGAACTGTGCTACCTATCAAGATTCATAAGGATAAAGAGAGTGGGAATATTTTAAACTTGGTGTTTGTTTGGGCTGAAGATGGCACGAATTTGAAGGTCGATGTTCCTGTTGTTTTCAAAGGTGAAGATGCTTGCCCCGGTCTTCAGAAAGGTGGTATTTTGAATAAGATCAGACCTAGTCTTACATATCTTTGTCCTTCTGAGCACATTCCTTCAAAAATTGAGGTGGATATCAGCAATCTAGATATTGAAGATAGGATATTCATGCGCGATATTGAGGTTCATCCATCTTTGAAGCTTCTAAGTAAGAACGAAAACATGCCCATATGTAAAATAGTTTCAACAAGTGTGGGAAACCAAGAACCAGGTGTTGAAAGTGCATTTGATGAGAGAAATGCAGAGACTTCCAAATAA 777 0.4466 MAQWWRSAAGHLRSVKANCTSSLSSLRCSHYHTIQAIPRESTGNKVAARDRMQGRIPAVVFFQNLLDKTPDSRSTSRKHLLTVEKKQIKAVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHKDKESGNILNLVFVWAEDGTNLKVDVPVVFKGEDACPGLQKGGILNKIRPSLTYLCPSEHIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKIVSTSVGNQEPGVESAFDERNAETSK* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2085 258 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Psa4g2085 258 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 243 - -
Psa4g2085 258 CDD Ribosomal_L25_TL5_CTC 33 143 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Psa4g2085 258 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 243 - -
Psa4g2085 258 SUPERFAMILY Ribosomal protein L25-like 38 234 IPR011035 GO:0006412
Psa4g2085 258 Pfam Ribosomal protein TL5, C-terminal domain 152 235 IPR020057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2085 Psa-Chr4 162287978 162290839 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2085 K02897 - gmx:100802599 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2085 4 162287978 162290839 Psa4g2085 4 162287978 162290839 ECH