Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1853 ATGGTTCCTAAAGTTCATAGTGATCTTCAAATGAGTATGGCCGGGAATGAGAGTGGCCAAAAGATTGAGAGCTGGAAGAAATATATGCATGTTTTTGGGGAGAGGCTTATAAGGTTTCCTTGTTTGGCTTGGAACACTATATGGAAAGTGGGATGTGATGATCCAAGAAGGTTGATACATGCATTCAAAGTTGGTTTATCTCTTACTCTTGTATCATTGCTTTATGTTTTGGAGCCACTCTTTCAAGGGATTGGCCAAAATGCTATTTGGGCTGTCATGACCGTCGTCGTGGTTTTCGAGTTCACCGCAGGGGCAACATTATGCAAAGGGTTGAATAGAGGATTGGGGACACTATTAGCAGGATTAATGGCATTCCTTCTAGATTATATTGCAAATGCATCTGGTCATATACTTCAAGCTGTTTCCATTGCTGTTGCAGTTTTGATAATAGGAGCTGCAGCCACATATATTAGGTTCATTCCTTCTATAAAGAAGAATTATGATTATGGTGTGGTTATATTTCTCTTAACCTTCAACTTGTTAACTGTTTCGAGTTATCGGGTTGATCACGTCTTCAAACTCGCACATGACCGCTTCTACACCATAGCCATAGGTTGTGCTGTTTGTCTTGTGATGAGCCTTTTCGTCTTTCCGAATTGGTCGGGGGAAGATTTACATCATTCCACTGCTTTCAAACTCGACGGCCTAGCCAAATCTATAGAAGCTTGTGTCGATGAATATTTCTATGGGCAAGTTGATTTTTCTGGTGATGTAAAATCCTCAGAAGATCCAATATACAAAGGTTATAAGGCAGTTTTGGATTCAAAAACCACCGATGAAACATTGGCATTACATGCTAGTTGGGAGCCAAGATATTTTAGGTATTGTCACAAATTTCCGTCACAACAGTATGTAAAAGTCGGCGCTGTTCTTCGTCAATTTGGATATACAGTAGTAGCTCTACATGGCTGTTTGAGAACAGAAATTCAGACACCGCAATCTGTTCGAGTTCTATTCAAGGATCCTTGCATAAGACTAGCCGCAGAGGTGTCAAAAGTACTGATAGAACTTGCCAACAGCATAAGAAGTCGACGCCATTGCTCACCAGAAATACTCTCTGATCATCTTCATGAAGCATTACAAGACCTCAACACCGCGATAAAATCACAGCCACGGCTCTTCTTAAGCTCGAAAGACATCCAAGCTAATAACATGCTGGCAACCATAGCTGCTGCACAAGCAGGAGCAATAGAACAGATCACAAAACATGGAAAAGCCTCATTGCCAAGTGTTAAAACAGATTCTTCAGCTTTGTTAGATTGGAAAACCAAAAGGCTATCTGCTGAGCAGACTAAGGATGTAGAACAATTACCGGAACGTAAGGTGTTGAGAAAACAGATGAGTAAAATTGCTATTACTAGTCTTGAGTTTTCTGAAGCATTGCCTTTTGCTGCTTTTGCTTCTTTGCTTGTGGAAACGGTGGCGAAACTGGATTTGATCATTGATGAAGTTGAAGAACTTGGGAGGTTGGCGTGTTTCAAAGAGTATAGACATGGTGATGAGTTTTTTGATAGTAGTGAGAAACCAAGAGTTGATGTGTTGGAGAATCATTTACCTTCTCATGGTGGAGAATGA 1635 0.4067 MVPKVHSDLQMSMAGNESGQKIESWKKYMHVFGERLIRFPCLAWNTIWKVGCDDPRRLIHAFKVGLSLTLVSLLYVLEPLFQGIGQNAIWAVMTVVVVFEFTAGATLCKGLNRGLGTLLAGLMAFLLDYIANASGHILQAVSIAVAVLIIGAAATYIRFIPSIKKNYDYGVVIFLLTFNLLTVSSYRVDHVFKLAHDRFYTIAIGCAVCLVMSLFVFPNWSGEDLHHSTAFKLDGLAKSIEACVDEYFYGQVDFSGDVKSSEDPIYKGYKAVLDSKTTDETLALHASWEPRYFRYCHKFPSQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPQSVRVLFKDPCIRLAAEVSKVLIELANSIRSRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLSSKDIQANNMLATIAAAQAGAIEQITKHGKASLPSVKTDSSALLDWKTKRLSAEQTKDVEQLPERKVLRKQMSKIAITSLEFSEALPFAAFASLLVETVAKLDLIIDEVEELGRLACFKEYRHGDEFFDSSEKPRVDVLENHLPSHGGE* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1853 544 Pfam Aluminium activated malate transporter 48 508 IPR020966 GO:0015743
Psa4g1853 544 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 540 - -
Psa4g1853 544 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1853 Psa-Chr4 132475718 132478767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1853 34 516 Miscellaneous Gene Families AT4G17970 63.107 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1853 - - gmx:100819748 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1853 4 132475718 132478767 Psa4g1853 4 132475718 132478767 ECH