Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1851 ATGGCCACCACACCTTATCCACAACAACCACCTTCACGTGCCTTTCTAAATACAATCCAAGAAATCACTCAAATCTATTCTTCACTGCCACCTAGACCTTCCATAGAAGAAGTAGAAGCTGCCACTTCTACTCTTGACACCCTTAACAACGTGGAACAAACCAAACTCCAAGATATCTCAAACCAAAAACCACCACAAGATGTTCCTGAAGAACTTTTCTCTGTTCTTCAACAACTCAAGAACACCATGGTCCTCTTTCAAAGTCATCAACTGAGAAAAGAAGCTATTCACCTTCTTCAACTTGAAAAGATGTTTCAAACCTTTGGTGATCTCATTCAAAGAGCTTCTGAATTTGTTTCTCCTGATGATGAGGATACACAGAAAAAGAAAGTTTCCACTTTAATAGAAGCTATGGTTACCTATGAAAAAGAGGTACATGAAGAACCTCAAAAGAGTGATGAAGATTTTGAAGCTCAAAAGGGCTCCTCAGTACAAAAGCAGCTTTTGATAACAGGAGATGGAAGCATTGAGAAATTGAGTCTAATGAAAGTGGCTACTATGATTGAAAATTGTGCTAATAACAAAGACACAACTCTTGAGCTTAGAGGAAAATTAGTGGATCAAATGGAATGGTTACCATTATCAATTGGGAAATTATCTGATGTAACTCAAATAGACCTATCTGAAAACCGAATCATGGCTCTTCCAACAACAATCATAGGTCTAAAAGCTTTAACAAAGCTTGATCTTCACTCAAACCAACTCATAAACCTTCCAAACTCGTTCGGCGAATTGATAAACCTAATTGAACTTGACCTACATGCCAATAGATTGAAATCACTTCCTGATAGTTTCGGAAACTTGACGAATCTCGCTGATCTTGACTTAAGTTCAAATGATTTCAAACAGTTACCTGAGTCCATTGGGAGTTTAATCAGCTTAAAGAGACTAAATGCTGAAACAAATGAGATTGAGGAACTACCTTTCACAATTGGAAATTGCTCTTCACTAAGTGTGTTGAAGCTAGATTTCAATGAACTCAAAGCACTTCCAGAGGCAATAGGGAAACTTGAGAGTTTGGAGATTCTCACTTTGCACTATAATAGAATCAAGAAGTTGCCTACAACAATTGGTAATCTAAGTAATTTGAAGGAACTTGATGTTAGTTTCAATGAACTCGAATTCGTACCGGAGAATCTTTGTTTCGCGGTTGGTTTGAAGAAACTGAACTTGGGAAAGAATTTTGCTGATCTAAGAGCATTGCCAAGATCAATTGGAAACCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAGCTTTGCCGGAGTCTTTTAGGTTCTTGTCTAAGTTGAGAGTTTTTCGGGCTGATATAACTCCTCTCGAGTTACCACCAAAAGAAGTTGTCAAGTTGGGTGCTCAGGAAGTTGTGAAGTATATGGCTGATTATGTGATCAATAGGGATGCAAAACTCTTGTCAATAAAGAAGAAAAAGACAGGAATTTGGTTTTGGTTTTGTTCCATATGTTGGCCTAAGCAAGAATGA 1554 0.3752 MATTPYPQQPPSRAFLNTIQEITQIYSSLPPRPSIEEVEAATSTLDTLNNVEQTKLQDISNQKPPQDVPEELFSVLQQLKNTMVLFQSHQLRKEAIHLLQLEKMFQTFGDLIQRASEFVSPDDEDTQKKKVSTLIEAMVTYEKEVHEEPQKSDEDFEAQKGSSVQKQLLITGDGSIEKLSLMKVATMIENCANNKDTTLELRGKLVDQMEWLPLSIGKLSDVTQIDLSENRIMALPTTIIGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANRLKSLPDSFGNLTNLADLDLSSNDFKQLPESIGSLISLKRLNAETNEIEELPFTIGNCSSLSVLKLDFNELKALPEAIGKLESLEILTLHYNRIKKLPTTIGNLSNLKELDVSFNELEFVPENLCFAVGLKKLNLGKNFADLRALPRSIGNLEMLEELDISDDQIKALPESFRFLSKLRVFRADITPLELPPKEVVKLGAQEVVKYMADYVINRDAKLLSIKKKKTGIWFWFCSICWPKQE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1851 517 Gene3D Ribonuclease Inhibitor 166 489 IPR032675 -
Psa4g1851 517 ProSiteProfiles Leucine-rich repeat profile. 267 288 IPR001611 GO:0005515
Psa4g1851 517 ProSiteProfiles Leucine-rich repeat profile. 359 380 IPR001611 GO:0005515
Psa4g1851 517 SUPERFAMILY L domain-like 195 458 - -
Psa4g1851 517 SMART LRR_typ_2 288 310 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 265 287 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 242 264 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 335 356 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 428 450 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 311 334 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 219 241 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 380 403 IPR003591 -
Psa4g1851 517 SMART LRR_typ_2 357 379 IPR003591 -
Psa4g1851 517 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Psa4g1851 517 PANTHER LEUCINE-RICH REPEAT-CONTAINING 16 511 - -
Psa4g1851 517 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 16 511 - -
Psa4g1851 517 ProSiteProfiles Leucine-rich repeat profile. 244 265 IPR001611 GO:0005515
Psa4g1851 517 Pfam Leucine rich repeat 336 393 IPR001611 GO:0005515
Psa4g1851 517 Pfam Leucine rich repeat 267 324 IPR001611 GO:0005515
Psa4g1851 517 SMART LRR_bac_2 380 399 - -
Psa4g1851 517 SMART LRR_bac_2 357 376 - -
Psa4g1851 517 SMART LRR_bac_2 242 261 - -
Psa4g1851 517 SMART LRR_bac_2 428 447 - -
Psa4g1851 517 SMART LRR_bac_2 334 353 - -
Psa4g1851 517 SMART LRR_bac_2 265 284 - -
Psa4g1851 517 SMART LRR_bac_2 288 307 - -
Psa4g1851 517 SMART LRR_bac_2 311 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1851 Psa-Chr4 132356134 132358699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1851 306 460 Receptor kinase-like Gene Family AT3G11080 33.750 6.69e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1851 - - lja:Lj0g3v0066329.1 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1851 4 132356134 132358699 Psa4g1851 4 132356134 132358699 ECH