Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1823 ATGGGTTCTAAAAATGCCCCACCGGGCAACAGAACACGGAGGCCTTTGTCGATTTTTGCTGTGCTTGCTCTATGTTGTACTTTTTATCTTTTGGGAGCATGGCAAAGAAGTGGTTCCGGAAAGGGAGACAGTCTTGCATTGAAGGTAAATAAGATGCATACAGACTGCAACATTGTGCCGAATTTGAGTTTTGAACCCCATCACAAATATGTAGATATTGTCGCATCATCTGAACCGAAAGCTAAAAAGTTCAAGGCGTGTGATGTAAAATATACTGATTATACACCTTGCCAAGAGCAAGATCGGGCAATGACGTTCCCGAGAGAAAATATGATTTATAGGGAAAGACATTGTCCACCTCAAGAGGAGAAATTGCGTTGCCTAATTCCTGCTCCCGATGGGTATACGTCTCCTTTTCCTTGGCCTAAAAGCCGTGATTATGTCTACTATGCTAATGTACCGTATAAGAGTTTGACAGTGGAGAAGGCTGTTCAAAACTGGGTGCAATTCCAAGGAAATGTGTTCAAATTTCCAGGGGGAGGAACCATGTTCCCTCAAGGAGCAGATGCTTATATTGATGAACTTGCATCAGTTATTCCAATTGCAGATGGTACTGTCAGAACAGCATTGGACACTGGTTGCGGAGTTGCAAGCTGGGGAGCATACTTGCTAAAGAGAAATGTGATAGCTATGTCGTTTGCTCCAAAGGATAACCACGAAGCACAAGTTCAGTTTGCTCTGGAACGAGGAGTACCTGCTATTATTGGTGTTCTTGGTACAATCCGTCTTCCATTCCCATCAAGAGCCTTTGATATGGCTCAGTGTTCTCGATGTCTAATACCATGGGCTTCAAATGATGGCACGCAGCTAATGGAAGTCGATCGGGTTTTAAGGCCTGGTGGATATTGGATTTTGTCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGAAGCGGTCAAAGGAGGATCTGAAGGCAGAGCAGAAAAAAATTGAGGATTTAGCCGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGTGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCCTGTCAAAGAAAGTCTCCCGATTTATGTGATTTAGATAATGCTGATGATGTTTGGTACAAAAAGATGGAGGTCTGCAAAACCCCTATCCCCGAGGTAACCAGCAAAACTGAAGTTGCCGGTGGGGAATTGAAGAAGTTTCCTGCTAGGCTTTTCGCAGTTCCTCCTCGAATAGCTAAAGGCCTTGTTCCAGGCGTAAAAGCTGAATCTTATCAAGAGGACAACAAATTATGGAAAAAGCGTGTTACTAATTACAAAAGAATTAATAGATTGATCGGTACGACAAGATATCGAAATTTGATGGACATGAATGCAGGCCTTGGAGGATTTGCAGCTGCACTTGAATCACAAAAATCTTGGGTGATGAATGTTGTGCCCACAATTGCTGACAACACTTTAGGTGTTATCTATGAAAGAGGTTTGATCGGCATTTATCATGACTGGTGTGAAGGCTTTTCTACATACCCAAGGACATATGATCTTATTCATGCTAATGGTTTATTTAGTTTGTACCAGGACAAGTGCAACCTAGAAGACATCCTTCTAGAGATGGACCGAATCTTGAGGCCCGAAGGATCGGTCATAATCCGCGACGAAGTAGATGTGCTTAACAAGGTTAACAAAATTGTTGGAGGAATGAGATGGGAAGCTAAAATGATGGATCATGAGGATGGTCCACTTGTGCCTGAGAAGATATTGGTGATTGTTAAAGAGTATTGGGTTGGCACTAGTAAAAACAACACATCCAGTTAA 1836 0.4227 MGSKNAPPGNRTRRPLSIFAVLALCCTFYLLGAWQRSGSGKGDSLALKVNKMHTDCNIVPNLSFEPHHKYVDIVASSEPKAKKFKACDVKYTDYTPCQEQDRAMTFPRENMIYRERHCPPQEEKLRCLIPAPDGYTSPFPWPKSRDYVYYANVPYKSLTVEKAVQNWVQFQGNVFKFPGGGTMFPQGADAYIDELASVIPIADGTVRTALDTGCGVASWGAYLLKRNVIAMSFAPKDNHEAQVQFALERGVPAIIGVLGTIRLPFPSRAFDMAQCSRCLIPWASNDGTQLMEVDRVLRPGGYWILSGPPINWKTYYQTWKRSKEDLKAEQKKIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPDLCDLDNADDVWYKKMEVCKTPIPEVTSKTEVAGGELKKFPARLFAVPPRIAKGLVPGVKAESYQEDNKLWKKRVTNYKRINRLIGTTRYRNLMDMNAGLGGFAAALESQKSWVMNVVPTIADNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVLNKVNKIVGGMRWEAKMMDHEDGPLVPEKILVIVKEYWVGTSKNNTSS* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1823 611 PANTHER METHYLTRANSFERASE PMT14-RELATED 5 605 - -
Psa4g1823 611 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 598 IPR004159 GO:0008168
Psa4g1823 611 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Psa4g1823 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 322 IPR029063 -
Psa4g1823 611 Gene3D Vaccinia Virus protein VP39 190 370 IPR029063 -
Psa4g1823 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 594 IPR029063 -
Psa4g1823 611 Coils Coil 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1823 Psa-Chr4 129773662 129776545 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1823 - - mtr:MTR_4g098890 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1823 4 129773662 129776545 Psa4g1823 4 129773662 129776545 ECH