Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1810 ATGGATGGTCTCATCAAGGGCTTGATCGACGTAGCACTCGGCGGCAACAACGATCGCGATCAAGATAACGACGATGATCGTCAATCACGAGACGAACGATCCAGATCCTCTTGGGCGGAGGTCGTTTCCGGAGATCAGGATTCCGATCACCGTCCACAGCCTCAGCAGAAGCAGGAGGAGTGGCAATCCGAAGGTTCTAGAATCTCCGATAGACCTCACAACTACAAGAAGGAGGAAGTAGAACCATGGCAAAAGGATAGTAACCGTCAAAGGCCTAATAAGTCAGATGAAGATAACAACGATGGATGGCAGACTGTGGGCAAACCTTCAAGACAGACACACAAGGTTCCAAAGGATAACTGGAACAGCTATAAACTTCCTTCTGATGAGCAACAATACTCCAATGAAGTTGAAGTTGGTGCCAGAGTAGAGCCCTCAGAAGATGAACTGGCTGATCTATCAAGGGCTTGTGAAAAACTCTGGGAACTGGATTTAAATCGTTTGATACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAAGTTTATCAAAAGGATGATATGGCGCAGGGAAGCTTGTTTACATGGGTTAGTGATGATGTATTCCGAAAGCCTACTTATGCTCGATTTCTTTCACTGTTAGATAATTACAATCCACATCAAGGATCTAAGGAGGTTGTCACATCTGAAGAGAAACAAGAGCAAGCTTCTTTCATAGAAGAAATTAGTAGAACAGCCCCAATAAAGTATCTTCACAAGTTTCTTGCATCCAAAGGAATCACATCAGGGAGTTCCCAAGATTTCAAAAGATTGTTGACCAGTTTGTGGTTTGATCTTTATAGCCGATGTGGAACTTCTGGTTCCTCTTCCGCTTTTGAGCATGTTTTTGTTGGAGAAATCAAACAAAGCAGTGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCATGAAGAAGCAAATGGAAAAGTTGATTATCAAGGCTATATTTTTCCCCGTCGACGGGGTGAAACTCCTGACTCTGAAACCCAGCTTCTGACAATTCAATTTGAATGGAATGGTGTTCTGAAATCTGTATCAAGTACTTTGGTCGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTTCGCTGGTCAGGAAGATAACCACATTCAGCTTGGTCCATATGCAGTTAATATCAAGTGCTACCATTTAGGCAATCAAATTGGATCTGTTTTCCCCATTGCAGATTCATGA 1254 0.4274 MDGLIKGLIDVALGGNNDRDQDNDDDRQSRDERSRSSWAEVVSGDQDSDHRPQPQQKQEEWQSEGSRISDRPHNYKKEEVEPWQKDSNRQRPNKSDEDNNDGWQTVGKPSRQTHKVPKDNWNSYKLPSDEQQYSNEVEVGARVEPSEDELADLSRACEKLWELDLNRLIPGKDYEIDCGEGKKVYQKDDMAQGSLFTWVSDDVFRKPTYARFLSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLASKGITSGSSQDFKRLLTSLWFDLYSRCGTSGSSSAFEHVFVGEIKQSSEVSGFHNWLQFYHEEANGKVDYQGYIFPRRRGETPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFAGQEDNHIQLGPYAVNIKCYHLGNQIGSVFPIADS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1810 417 MobiDBLite consensus disorder prediction 1 136 - -
Psa4g1810 417 SUPERFAMILY EndoU-like 151 415 IPR037227 -
Psa4g1810 417 MobiDBLite consensus disorder prediction 99 135 - -
Psa4g1810 417 PANTHER PLACENTAL PROTEIN 11-RELATED 23 416 IPR039787 GO:0004521
Psa4g1810 417 PANTHER - 23 416 - -
Psa4g1810 417 Pfam Endoribonuclease XendoU 152 413 IPR018998 GO:0004521
Psa4g1810 417 CDD XendoU 149 413 IPR018998 GO:0004521
Psa4g1810 417 MobiDBLite consensus disorder prediction 17 98 - -
Psa4g1810 417 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 149 417 IPR018998 GO:0004521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1810 K14648 - gmx:100813919 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1810 4 127925351 127929292 Psa4g1810 4 127925351 127929292 ECH