Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1758 ATGGAAGCGGCGTTCAGTGTATACCAATTGACGCGTGATTCTAGAAACTTCGATCCCTTCGCCATGGCTACCGATTCTATTGAAAATTCATTCATATCCATTAATCCTGCCGAGCTACGTTTCCAATTTGAGTTGGAGAAGCAAACATTTTGCGATCTTAAAGTTTTCAATAAGACCGAGAACTTCGTTGCTTTTAAGGTGAAGACTACTTCACCGAAGAAGTACTTTGTTCGGCCTAACACTGGGGTTATACACTCATGGGACTCTTGCATCATCAGAGTCACCCTCCAAGCCCAACAAGAATATCCTCCTGACATGCAAAGCAAAGATAAGTTTCTCATACAAACTACACCTCTGGATCCAAACACTGATGTTGATGATCTTCCACCAGATACTTTTAATAAGAATAGTGGAAAGTTAACAGAAGAATTGAAACTAAAAGTTGTATATGTCTCTCCTACCTCACCTGGAGGAAGCACTAGAGATAATACAGTGAAGAAATCTGCACAAAAATTTGATACTTATTCGAGTCAAAGCTTGCAACAACTGAAGGAGGAAAGAGATGCTGCTGTCAGACAAACGCGGCAACTGCAACAGGAACTGGACATGGTGAAAAGGAGAAGAAGTAGAAGTGATCCGGGTTTCTCCTTCACTTTTGCTATGTTTGTGGGCTTTATTGGAGTCTTGTTCGGTTTGCTTTTGAAACTTTCATTGTCTTCACCACCTACACAATGA 735 0.4095 MEAAFSVYQLTRDSRNFDPFAMATDSIENSFISINPAELRFQFELEKQTFCDLKVFNKTENFVAFKVKTTSPKKYFVRPNTGVIHSWDSCIIRVTLQAQQEYPPDMQSKDKFLIQTTPLDPNTDVDDLPPDTFNKNSGKLTEELKLKVVYVSPTSPGGSTRDNTVKKSAQKFDTYSSQSLQQLKEERDAAVRQTRQLQQELDMVKRRRSRSDPGFSFTFAMFVGFIGVLFGLLLKLSLSSPPTQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1758 244 PIRSF VAMP_assoc_prot 154 236 IPR016763 GO:0005789
Psa4g1758 244 PIRSF VAMP_assoc_prot 25 182 IPR016763 GO:0005789
Psa4g1758 244 Gene3D Immunoglobulins 24 155 IPR013783 -
Psa4g1758 244 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 28 241 - -
Psa4g1758 244 Coils Coil 180 207 - -
Psa4g1758 244 ProSiteProfiles Major sperm protein (MSP) domain profile. 31 151 IPR000535 -
Psa4g1758 244 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 28 241 IPR016763 GO:0005789
Psa4g1758 244 SUPERFAMILY PapD-like 29 158 IPR008962 -
Psa4g1758 244 Pfam MSP (Major sperm protein) domain 32 129 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1758 Psa-Chr4 125107049 125111247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1758 - - gmx:100820122 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1758 4 125107049 125111247 Psa4g1758 4 125107049 125111247 ECH