Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1679 ATGATGCACCAAAGTGCTGCCAATATTTTGTACATGTGTATGGATGCGCCCACAAAGTTACCAATTCACCAGCTGGAAACATCAAAACCTTTGTCACTTTGCCTCAATTTCCTTTTTTCCCTTTATAAACAACAAACAAAGCACCCTCACTCGCATCATCATATCACTCTACTCCATCTACAAATTCAAAATTTTGTCTTCTCTTTTCTCTCTACTTCACTTCTCAACTCAAAACCCAACCAAATGACTTCTCGTTCCCCCATGTTGCTGCTCCTCCTCGTTACACTCTTCATTTCACATTCTTCATCTCAAATGCTACTATTACCCCTAACACACTCACTTTCCAAAACCCAATTCAACACCACCCACAACCTCCTCAAATCCATCTCTACTCGTTCTATATCACGCTTCCACCACTACAAACACCGCCATCAACTCTCTCTCCCACTCTCTCCAGGATCCGACTACACTCTCTCTTTCAACATTGGTCCCCACTCTCAACCCATCACTCTGTACATGGACACAGGAAGCGACCTTGTCTGGTTCCCCTGCACCCCTTTTAACTGCATACTCTGTGAACTCAAACCCAACCCTTATTCTTCATCTCCCCTCACCAACATCTCCCACAGTGTTCCCGTTTCATGCAGCTCTAAAGCATGCTCTGCAGCACACAGTTCCATCCCTTCTTCCGATCTCTGCGCAATGGCTCGTTGCCCTTTAGATTACATTGAAACAAAAGACTGCGGTTCTTTTCACTGTCCACCGTTTTACTATGCATACGGCGACGGAAGCTTGATCGCTCGTCTCTATCGTGATACACTTTCTCTTTCTTCACTGCAACTCAGAAACTTCACATTCGGTTGTGCTCATACCACGTTTGCAGAACCAACCGGCGTTGCTGGGTTTGGCCGTGGCTTGCTCTCTCTCCCAGCTCAGTTAGCTAAGCATTCTCCTCAACTTGGAAACCGTTTCTCTTATTGTTTGGCTTCTCATTCTTTTCGTCGTGAACGGGTTCAAAAACTGAGTCCACTCATTCTGGGTCGTTACGATGATGAAAAACAGAGGAATGGTGGTGAAGCTGTTGAGTTTGTTTATACTTCAATGCTTGAGAATCCAAAGTATCCTTATTTTTACTGCGTTGGTTTGAAAGGAATTTCCGTAGGGAAAAAGACCGTTCCCGCGCCGGGGATTTTACGGAGGGTGAATAAGAGAGGTGACGGCGGTGTAGTTGTGGATTCTGGTACGACGTTTACGATGCTGCCGGCGGGGTTTTATAACTCGGTGGTGGTGGAGTTTGACCGCCGTGTCAGGCGAGTTAACCCACGGGCCCGTGAGGTTGAGATGAAAACAGGGCTTTCGCCGTGTTACCATTTGAACGCGGCGGCGGAAATGCCGTCGTTGAAACTGCGTTTTGTTGGGGTGAATTCAAGTGTGGTGCTGCCTAGGAAGAATTACTTATATGAGTTTTTGGACGGTGGAAATGGGTTGAAGAAGAAGAGGAGAGTAGGTTGTTTGATGTTGATGAACGGTGGAGATGAATTTGAGGATAGTGGTGGGCCCGGGGCGATCCTTGGGAATTATCAACAGCAGGGATTTGAAGTTGAGTATGATCTTGAAAACAAGCGCGTGGGTTTCGCTAGGAGAAAGTGCGCGTCGCTTTGGGATCGACTCAATCGCGACAAAAACTAG 1689 0.4665 MMHQSAANILYMCMDAPTKLPIHQLETSKPLSLCLNFLFSLYKQQTKHPHSHHHITLLHLQIQNFVFSFLSTSLLNSKPNQMTSRSPMLLLLLVTLFISHSSSQMLLLPLTHSLSKTQFNTTHNLLKSISTRSISRFHHYKHRHQLSLPLSPGSDYTLSFNIGPHSQPITLYMDTGSDLVWFPCTPFNCILCELKPNPYSSSPLTNISHSVPVSCSSKACSAAHSSIPSSDLCAMARCPLDYIETKDCGSFHCPPFYYAYGDGSLIARLYRDTLSLSSLQLRNFTFGCAHTTFAEPTGVAGFGRGLLSLPAQLAKHSPQLGNRFSYCLASHSFRRERVQKLSPLILGRYDDEKQRNGGEAVEFVYTSMLENPKYPYFYCVGLKGISVGKKTVPAPGILRRVNKRGDGGVVVDSGTTFTMLPAGFYNSVVVEFDRRVRRVNPRAREVEMKTGLSPCYHLNAAAEMPSLKLRFVGVNSSVVLPRKNYLYEFLDGGNGLKKKRRVGCLMLMNGGDEFEDSGGPGAILGNYQQQGFEVEYDLENKRVGFARRKCASLWDRLNRDKN* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1679 562 ProSiteProfiles Peptidase family A1 domain profile. 156 546 IPR033121 -
Psa4g1679 562 SUPERFAMILY Acid proteases 151 555 IPR021109 -
Psa4g1679 562 PANTHER BNAA01G17170D PROTEIN 84 555 - -
Psa4g1679 562 PANTHER OS07G0603500 PROTEIN-RELATED 84 555 - -
Psa4g1679 562 CDD pepsin_A_like_plant 156 550 IPR034161 -
Psa4g1679 562 Pfam Xylanase inhibitor N-terminal 156 331 IPR032861 -
Psa4g1679 562 Gene3D Acid Proteases 144 338 IPR021109 -
Psa4g1679 562 Pfam Xylanase inhibitor C-terminal 378 546 IPR032799 -
Psa4g1679 562 Gene3D Acid Proteases 354 554 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1679 Psa-Chr4 118329464 118331712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1679 156 553 Miscellaneous Gene Families AT1G77480 25.962 4.87e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1679 - - gmx:100805699 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1679 4 118329464 118331712 Psa4g1679 4 118329464 118331712 ECH