Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1674 ATGGCAACTCGATCGAATTTCTACAAGAATCCCTCAATCTCTTACAACAAAAACTTAAGCCTCTCTTCCGTTCTTCAAAATCTCCATGCTTACAACATCGCCACCGGCAACGTTACTTCCGACGACCAACCGCATCCTGCTCCCACTCCCACCGCCTCCGTCAAACGTCCCCGCCATCCCCGTCCACCGCCGTCCCGTCATAACCACCATAAGGATGAGGTTGACGATTTCCCTTCCTCTATGTCCCACTATGATTACATTCAAAAGAGAAGGAAGGAAGTTGATTTGTCTAAGAACTGTGAGCGCGTTGAATTAACCGAAGATGTCTTGGGAAACCCTAATTCTACTGTCCCCTTGGTGGATTATGCTAGTGATGAAAGTGGTTCTTCAGAATGTGAAGAAACTCATACTCTTCCAAATTCTGGTCACAAACAAGAATTTAATGGAATCAAAAGCAGAAATGAACAGCGTTTTCCTGTATCTGGAGAACCTGTTTGTCTTATATGTGGAAGATATGGTGAATATATATGCAATGAGACAGATGATGATGTCTGTAGCATGGAGTGCAAAAATGAACTTTTGGAAATTCTTAAACTCAATGAGGGATCCTCCCATGACCAAGCTAAAGATTGCTCCTCATCTGGAATAAGGGATGCCTTACCAGTTCCCGTCTTTAGTGATGATACCTGGGATTATAATCGGCATCGCTGGTCAAAAAAGAGATCTAGCCTTTCCACATATGAATGTTGGAAATGTCAGAGACCTGGGCATTTAGCTGAAGACTGTCTAGTAAAGAGTTGCAGTGAGACCACAGCGGGAGGAAGTAATAGATCTAGCTCCATTCCAAAGGATCTTTTTGGATTGTATAAAAGATGCCACCAGCTTGGTAAAGACTTGTTAGCTGCAAACTGTAATGCATGCCACAGCTCAGCGAATTTGGCCACATGCATCGATTGTAGTATTGTTCTTTGTGATGGGGCAGGTCACCTGGATGATCATATAAAAAAACACCCTTCCCATCAAAAATATTACTCACACAAGCTAAAACGTCTGGTTAAATGCTGCAAGTCAACTTGCAGGGTCACTGACATCAAAGATCTCTTGGTTTGTCACTATTGCTTTGATAAAGCCTTTGAAAAGTTCTATGACATGTATACTGCAACATGGAAAGGAGCTGGGTTTTCAATTATATCAGGTTCTATATGCTGTGAAGACCATTTCATGTGGCACAGGATGAATTGTTTGAATGCAGATGCAGAAGGAAGTTCATATATTGTAAAAAACAATGGACTCAGAGGCAAACCTGCGCAACTTAGTGATTTCATCTTTTGA 1332 0.4204 MATRSNFYKNPSISYNKNLSLSSVLQNLHAYNIATGNVTSDDQPHPAPTPTASVKRPRHPRPPPSRHNHHKDEVDDFPSSMSHYDYIQKRRKEVDLSKNCERVELTEDVLGNPNSTVPLVDYASDESGSSECEETHTLPNSGHKQEFNGIKSRNEQRFPVSGEPVCLICGRYGEYICNETDDDVCSMECKNELLEILKLNEGSSHDQAKDCSSSGIRDALPVPVFSDDTWDYNRHRWSKKRSSLSTYECWKCQRPGHLAEDCLVKSCSETTAGGSNRSSSIPKDLFGLYKRCHQLGKDLLAANCNACHSSANLATCIDCSIVLCDGAGHLDDHIKKHPSHQKYYSHKLKRLVKCCKSTCRVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGFSIISGSICCEDHFMWHRMNCLNADAEGSSYIVKNNGLRGKPAQLSDFIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1674 443 SUPERFAMILY Retrovirus zinc finger-like domains 232 262 IPR036875 GO:0003676|GO:0008270
Psa4g1674 443 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 443 - -
Psa4g1674 443 Gene3D - 148 204 - -
Psa4g1674 443 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 443 - -
Psa4g1674 443 MobiDBLite consensus disorder prediction 37 80 - -
Psa4g1674 443 ProSiteProfiles Zinc finger CCHC-type profile. 249 262 IPR001878 GO:0003676|GO:0008270
Psa4g1674 443 MobiDBLite consensus disorder prediction 66 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1674 - - gmx:100814892 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1674 4 118165950 118175232 Psa4g1674 4 118165950 118175232 ECH