Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1637 ATGGCTTCCAAGGTTGCTATAATCCTTGCCCTAAACATCCTCTTTTTCACTGCTGTAACCTCCAACTATGTTCCATGTCCTCCACCACCCCCAACAGCTGACAATCACCACCACTCACATCCAAAGAACCCAACATGTCCCAGAGACACAATTAAGTTTGGTGTGTGTGCTGATATATTAGGTTTGATTAATGTTCAACTTGGTAAACCACCAAAGACACCATGCTGTTCTCTCATCGACGGTCTTGCTAATCTTGAAGCTGCTGTCTGTCTTTGCACTGCTCTTAAGGCTAATGTCTTAGGCATTAACCTTAATCTTCCTATTAATTTGAGTTTGATCCTTAATTACTGTGGAAAGGGAGTTCCAAAGAAGTTCGTTTGCGCTTAA 387 0.4212 MASKVAIILALNILFFTAVTSNYVPCPPPPPTADNHHHSHPKNPTCPRDTIKFGVCADILGLINVQLGKPPKTPCCSLIDGLANLEAAVCLCTALKANVLGINLNLPINLSLILNYCGKGVPKKFVCA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1637 128 Pfam Hydrophobic seed protein 45 128 IPR027923 -
Psa4g1637 128 CDD HPS_like 43 127 IPR027923 -
Psa4g1637 128 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 128 - -
Psa4g1637 128 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 48 127 IPR036312 -
Psa4g1637 128 Gene3D - 38 128 IPR036312 -
Psa4g1637 128 PANTHER - 2 128 - -
Psa4g1637 128 SMART aai_6 46 127 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1637 Psa-Chr4 114465575 114466754 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1637 1 127 Acyl Lipid Metabolism Gene Families AT4G22520 26.772 1.32e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1637 - - gmx:100500229 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1637 4 114465575 114466754 Psa4g1637 4 114465575 114466754 ECH