Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1614 ATGGCGGTTTCACCTTACGCCGCCGTTTCAACCCCTCGTGTTTGTTCTCCACCTAGTGTTTCCACTAAAATCTACTCTGGATTGAAACTCCAATCTTCACGTTCTTTTGGAGCGTCTTCCGTTTCATCTAGCGTAAATGCTCAGTTTTTCGGTAAAGTTAACAAAGTTCTCAATTTCCGGTATGCTAACCAGAAACCAGTTAGGGCACAATTTCTAATGATGCCCATTGGAACTCCTAGAGTACGCTATAAAACACCCGGTGAAGATTCTTGGCAATGGATTGATTTATGGAATGCCCTTTATCGAGAACGTGTTGTCTTCATTGCACAAGAGATAAATGAAGAATTTAGTAATCAAATATTGGCAACTTTGCTGTATCTTGACAGTATAGATAACACCAGGGAAAACGTACTGCAATGCCTCTTTCAAGAATTGCTCTCCAATCTCCAGCAGGATCTGCTCGTGGTCGGGCGGATGATATTCGAAATGAAGCAGATGAACTTCTTAGAATCAGAGATTACGTTTTCAAGGAGTTAG 537 0.4153 MAVSPYAAVSTPRVCSPPSVSTKIYSGLKLQSSRSFGASSVSSSVNAQFFGKVNKVLNFRYANQKPVRAQFLMMPIGTPRVRYKTPGEDSWQWIDLWNALYRERVVFIAQEINEEFSNQILATLLYLDSIDNTRENVLQCLFQELLSNLQQDLLVVGRMIFEMKQMNFLESEITFSRS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1614 178 SUPERFAMILY ClpP/crotonase 88 137 IPR029045 -
Psa4g1614 178 Gene3D - 77 140 - -
Psa4g1614 178 Pfam Clp protease 92 135 IPR023562 -
Psa4g1614 178 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 15 135 IPR023562 -
Psa4g1614 178 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC 15 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1614 Psa-Chr4 112834254 112836422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1614 K01358 - gmx:100793679 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1614 4 112834254 112836422 Psa4g1614 4 112834254 112836422 ECH