Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1611 ATGGAGTGGTCAGCTTGTACGGATGAGTACGAGAAGCTTGTTTTTCGCATGAGTACTCCCAGGGTTGTCATTGACAATGCAGTTTGCTCTAATTCAACTATAGTCAAGTTTGATAGTGCTAGAAAGCATGGAATTCTTTTGGAAGCAGTACAAATTCTCAGCGATCTGAACCTTTTCATTAAGAAAGCATATGTTTCCTCTGATGGCAGATGGTTCATGGATGTTTTTCATGTTACGGATCAAGATGGAAATAAGTTGACAGATGAGAGTGTTTTGAAGTATATTGAACAGTCACTTGGTAGCATTCACAATGGAAAAACCAATCACAGAAATGGTCTCACTGCTTTGGAATTAAAGGGGACGGATCGTGTTGGTCTTCTTTCGGAAGTGTTTGCGGTATTGGCTGAGTTTCAATGCGATGTGGTTGAAGCTAAAGTTTGGACACACAATGGCCGGATTGCTTCTTTAATTTATGTTAAAGACTGCACCTCTGGGACCTCTATTGAAGATTCACAGAAAATTAATCGGCTCGAAGCACGTTTAAGATATGTTTTACAAGGAGATGGTGATATTAGGAGTGCAAAAACATCTATCTCTGATGTTGTTATTCACCCTGAAAGAAGGCTCCACCAAATGATGTTTGCTGACCGTGATTATCAAAAGAGTCCAATTTTCAAGTTTGCTTCAGAAACACCGTTAGTTACTGTCCAAAATTGGGCAGAAAGGAGTTATTCGGTCGTTAATGTCCAGTGCAAGGATCGCGCCAAGTTATTGTTTGATGTTGTTTGCAATCTGACAGACATGGAATATGTTGTGTTCCATGCAACAATAAACACAAGGATTGACCAAGCTTACATGGAGTTTTATATAAGACATAAGGATGGCACCCCGATTAGTTCAGAACCGGAGCGTCAACGAGTGATTCAATGCTTGCAAGCGGCTATAGAGAGAAGATCATGTGAGGGTGTTAGACTAGAGTTTTCTGCGGAAGACAGACAAGGTCTTCTAGCCGAGGTGATGCGAACGTTCCGAGAGAACGGGTTGAATGTGACTAGGGCAGACATATCTACGACCGGTGACTTGGCCGCGAATGTTTTCTATGTAACAGATTCCATCGGATACCCGGCTGATGAAAAAATCATCGAGTCGGTTAGACAGAAAATTGGGTTAAGCAATTTGAAAGTGAAGGAGTTGCCGATTGTAAGTCATGAGAAGGCAGAGAGGGAAGATCAATCTGTTGGAGTTGGTGGGGCAGTGTTATTGTCCCTTGGCAGCATTGTGAGAAGGAATCTATACAATTTGGGTTTAATCAAATCTTGTTCTTGA 1326 0.4163 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSSDGRWFMDVFHVTDQDGNKLTDESVLKYIEQSLGSIHNGKTNHRNGLTALELKGTDRVGLLSEVFAVLAEFQCDVVEAKVWTHNGRIASLIYVKDCTSGTSIEDSQKINRLEARLRYVLQGDGDIRSAKTSISDVVIHPERRLHQMMFADRDYQKSPIFKFASETPLVTVQNWAERSYSVVNVQCKDRAKLLFDVVCNLTDMEYVVFHATINTRIDQAYMEFYIRHKDGTPISSEPERQRVIQCLQAAIERRSCEGVRLEFSAEDRQGLLAEVMRTFRENGLNVTRADISTTGDLAANVFYVTDSIGYPADEKIIESVRQKIGLSNLKVKELPIVSHEKAEREDQSVGVGGAVLLSLGSIVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1611 441 SUPERFAMILY ACT-like 321 395 IPR045865 -
Psa4g1611 441 CDD ACT_ACR_3 244 318 - -
Psa4g1611 441 Gene3D - 322 392 - -
Psa4g1611 441 Gene3D - 113 186 - -
Psa4g1611 441 Pfam ACT domain 120 159 - -
Psa4g1611 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Psa4g1611 441 CDD ACT_ACR_1 33 103 - -
Psa4g1611 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Psa4g1611 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Psa4g1611 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Psa4g1611 441 Pfam ACT domain 324 384 IPR002912 -
Psa4g1611 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
Psa4g1611 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1611 Psa-Chr4 112407607 112411060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1611 - - gmx:100794729 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1611 4 112407607 112411060 Psa4g1611 4 112407607 112411060 ECH