Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1522 ATGGCTCAGTTGAAATCACTTCCTTCACATCCATGCCTTACTGCCACTCCTTCCCTAAATGCAACAGAGCACATTCTGTTTAATAGGTTCTGGAAGGCAAGCCCATGTTCATTTAAACAGTTGAAACCAAGAGCTAATGTTGGTGCCCGTAGACTTCAAGTTGTAAAAGCAGTATCCCACGTTGATTCTGCTGTGGATGTTTCTGAAGCCAAGAAGGGTAGCGGGCTGCGTGGAAAATTGAACAAGGTTGTACTGGCTTACAGTGGTGGCTTAGACACATCGGTCATTGTCCCATGGTTGAGGGAGAATTATGGTTGTGACGTTGTTTGTTTCACTGCTGATGTTGGCCAAGGTATAAAAGAATTGGACGGTTTAGAAGCCAAAGCCAAAGCCAGTGGAGCTTCTCAATTAGTTGTAAAGGACTTGCAGGAGGAATTTGTTAAAGATTACGTATTTCCTTGCCTGCGTGCTGGTGCCATTTATGAGAGGAAGTATTTGCTTGGGACCTCAATGGCCCGTCCTGTAATTGCAAAGGCCATGGTGGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTCGCCCATGGGTGTACAGGAAAAGGAAATGATCAGGTTCGATTTGAGCTCACTTTCTTTGCGCTGAACCCCAAGCTAAACATTGTGGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCCATTGAGTATGCTAAAAAGCACAATGTTCCTGTTCCAGTGACAAAGAAATCCATATATAGCAGGGATAGAAACCTATGGCACTTAGCCACCGAGGTATTTGGAAATTGGTATAGAGTCAGGACTTCTGTTTCACTCAATGGAAACTTTCACCAGCACTTTACTCACGAGCTCAATGAGATAGGTGGAAGCATGGATTGGCCGATCGACATGGTTGAGAATCGGCTTGTAGGCATGAAGAGCCGAGTTATGAAACTCCTGGGGAACTATCCTTTCGGCTGCGCACGGGAAGTTGTGTGTATGCTGGAAGATGGTTTGATCCACTCCGTGAGTCCATGGACGCCTTTATGCAGAAGATTACGAGACCACAACACAGGCTCTGTGACTTTGAAATTGTACAAAGGGGTCGTTACCGTAACAGGTAGGAAGAGTCCCTTCAGCCTTATAGGCAAGATATCTCATCATTCGAGGGCAGCGATGTATATGATCAAGCTGATGCTGCTGGTTTTATCCGCTTTACGGCCTTCCAATGAGAGTCAGAGCAATGCTTGA 1251 0.4596 MAQLKSLPSHPCLTATPSLNATEHILFNRFWKASPCSFKQLKPRANVGARRLQVVKAVSHVDSAVDVSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGIKELDGLEAKAKASGASQLVVKDLQEEFVKDYVFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLATEVFGNWYRVRTSVSLNGNFHQHFTHELNEIGGSMDWPIDMVENRLVGMKSRVMKLLGNYPFGCAREVVCMLEDGLIHSVSPWTPLCRRLRDHNTGSVTLKLYKGVVTVTGRKSPFSLIGKISHHSRAAMYMIKLMLLVLSALRPSNESQSNA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1522 416 ProSitePatterns Argininosuccinate synthase signature 1. 86 94 IPR018223 GO:0004055|GO:0005524|GO:0006526
Psa4g1522 416 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 81 245 - -
Psa4g1522 416 PANTHER ARGININOSUCCINATE SYNTHASE 79 265 IPR001518 GO:0004055|GO:0005524|GO:0006526
Psa4g1522 416 Gene3D HUPs 77 253 IPR014729 -
Psa4g1522 416 SUPERFAMILY Argininosuccinate synthetase, C-terminal domain 250 382 IPR024074 GO:0004055
Psa4g1522 416 ProSitePatterns Argininosuccinate synthase signature 2. 195 206 IPR018223 GO:0004055|GO:0005524|GO:0006526
Psa4g1522 416 Pfam Arginosuccinate synthase 84 265 IPR001518 GO:0004055|GO:0005524|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1522 Psa-Chr4 106150629 106153559 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1522 K01940 - gmx:100816038 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1522 4 106150629 106153559 Psa4g1522 4 106150629 106153559 ECH