Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa4g1517 | ATGTCCACTAGAAATTTTGAGAAGGCTGCAACATTGTTTTTGGATTCTATCTCAACCTTTACAACCTATGAACTTTTTCCATATGACACCTTTATATTTTACACCGTTTTGACAAGCATCATAACACTGGATAGAGTTTCCTTAAAGCAAAAGGTAGTGGATGCTCCTGAGATCTTGACAGTGATTGGCAAGATCCCACATCTGTCAGAGTTTTTGAACTCCCTATATGATTGTCAATACAAGTCTTTCTTCTCAGCATTTGCTGGTTTGACGGAGCAAATTAAGTTGGATCGCTATTTGCATTCACACTTCAGGTATTACATGAGAGAGATCAGAGTTGTTATATATTCCCAGTTTTTGGAATCTTACAAGAGTGTGACAATTGAGGCCATGGCAAAAGCATTTGGAGTATCGGTGGATTTCATCGATGTGGAGCTATCACGTTTTATCGCAGCTGGGAAACTTCATTGCAAGATCGATAAGGTTGCAGGCGTTCTTGAAACCAACCGCCCTGATGCCAAGAATGCTCTTTACCAGGCAACTATTAAGCAAGGGGACTTCTTGTTGAACAGGATCCAGAAATTGTCGCGTGTGATTGATCTTTAG | 606 | 0.4026 | MSTRNFEKAATLFLDSISTFTTYELFPYDTFIFYTVLTSIITLDRVSLKQKVVDAPEILTVIGKIPHLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHSHFRYYMREIRVVIYSQFLESYKSVTIEAMAKAFGVSVDFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa4g1517 | 201 | SMART | PINT_4 | 102 | 185 | IPR000717 | - | |
| Psa4g1517 | 201 | SUPERFAMILY | "Winged helix" DNA-binding domain | 97 | 178 | IPR036390 | - | |
| Psa4g1517 | 201 | Pfam | 26S proteasome subunit RPN7 | 1 | 51 | IPR045135 | - | |
| Psa4g1517 | 201 | ProSiteProfiles | PCI domain profile. | 5 | 173 | IPR000717 | - | |
| Psa4g1517 | 201 | PANTHER | OS02G0600100 PROTEIN | 1 | 201 | - | - | |
| Psa4g1517 | 201 | PANTHER | 26S PROTESOME SUBUNIT 6 | 1 | 201 | IPR019585 | - | |
| Psa4g1517 | 201 | Pfam | PCI domain | 67 | 169 | IPR000717 | - | |
| Psa4g1517 | 201 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 102 | 185 | - | - | |
| Psa4g1517 | 201 | Gene3D | - | 1 | 152 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa4g1517 | K03037 | - | gmx:100810692 | 380.948 |
Event-related genes