Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1506 ATGAAGATCTTTATTCTTGTTTGTATCACTTTTATATGTGGATTTTTTGTAAATGTTTCAAATTCTAATCCTCTTCCATATGAATCTATCTTCAACTTTGGTGACTCTATAAGTGACACTGGAAATGCTATGAAGAGTTTTCATCCCATGCCTAGCAATAGTCCTTACGGCTCAACATATTTCAAACATCCCGCCGGGCGATTGTCGAATGGACGATTGATAATAGATTTTATTGCTGAAGCATATGGGTTGCCATTTTTGCCTGCCTTAAAGAATCTCACCAAAGACCAAGACATTAAGAAAGGAGTGAATTTTGCATTTGCTGGTTCCACTGCACTTGAATTAGAGTTTTTTAAACGTCATGGAGTCGATCCACCAGGGACAAATAACTCATTAAGTGTTCAACTTGGTTGGTTTAAGGAGCTAAAACCATCCATTTGCAAAAGCAAAGAAGAGTGCGATGGATATTTTAAAAATTCATTGTTTCTTGTTGGAGAGATTGGTGGAAATGATATTTTGTCGCATCTCACACATAAAACTGTTACAGAAATTCGAGAAATTGTTCCTTTAATGGTTGAAGCAATTGCGAATGCTACTTCGATATTAATCGAAGAAGGAGCCATAGAGCTAGCAATTCCTGGAAACTTTCCAATAGGGTGTAATGCTGCTTTTTTGTCAACAGTGGATAGTAAGAAGAAAGAAGACTATGATGAATTTGGATGCTTGATACCTTACAATACTCTAGTAGAATACTTTAATGAGCAACTAAAAAATGCTATAGAGATATTACGACAAAAAAATCCTCAAGCTAAGATAATATATTTTGATTACTATAACGATGCCAAACGTTTATATCAAACACCACAACAATATGGCTTTACTTCAGACAAGAACGAGATTTTAAAAGCATGTTGTGCATCAAATGGACCTTACAATGTCAATCCAAAGACACCTTGTGGAGTTCTTGGCACAACTGTTTGCTCAGATCCTTCAAAACAAATAAATTGGGATGGAGCCCACTTAACCGAAGCAGCTTACAAAATGATAGCAAAAGGATTAGTCGAAGGCCCTTTTGCAACACCTTCTCTTAAAACCTCTCTTTTTAAGATAGTCTAA 1116 0.3584 MKIFILVCITFICGFFVNVSNSNPLPYESIFNFGDSISDTGNAMKSFHPMPSNSPYGSTYFKHPAGRLSNGRLIIDFIAEAYGLPFLPALKNLTKDQDIKKGVNFAFAGSTALELEFFKRHGVDPPGTNNSLSVQLGWFKELKPSICKSKEECDGYFKNSLFLVGEIGGNDILSHLTHKTVTEIREIVPLMVEAIANATSILIEEGAIELAIPGNFPIGCNAAFLSTVDSKKKEDYDEFGCLIPYNTLVEYFNEQLKNAIEILRQKNPQAKIIYFDYYNDAKRLYQTPQQYGFTSDKNEILKACCASNGPYNVNPKTPCGVLGTTVCSDPSKQINWDGAHLTEAAYKMIAKGLVEGPFATPSLKTSLFKIV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1506 371 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 371 - -
Psa4g1506 371 Gene3D SGNH hydrolase 17 356 IPR036514 -
Psa4g1506 371 CDD SGNH_plant_lipase_like 29 357 IPR035669 -
Psa4g1506 371 SUPERFAMILY SGNH hydrolase 32 353 - -
Psa4g1506 371 Pfam GDSL-like Lipase/Acylhydrolase 30 351 IPR001087 GO:0016788
Psa4g1506 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1506 Psa-Chr4 105136930 105138581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1506 25 356 Acyl Lipid Metabolism Gene Families AT4G10950 26.648 1.82e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1506 - - gmx:100794616 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1506 4 105136930 105138581 Psa4g1506 4 105136930 105138581 ECH